Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02100 ATGTCATCAGTGTTTGAAAAAGGAAAGGGCAGCGTTCGTACCTTGTATCCCAATCTTATAATATCAGACATTTCACACGAGTGTCCCTTTTGCCAAAACAATTGCAATTGCAGTGTTTGCTTGGGCTCAACAGGAACGATTAAGACATCTAACAGCAGCATCACAAATGACGAAAAGGTTCAACATCTTCAATACATGATTGACTTACTCATTCCATTTATACAACATATTTGTGAAGAACAAACTCAAGAGCACGAGATTGAAGCTAAAATACAAGGAAAATCAAGCTCTGAGATTGAGATACCACAAACATCTTGTGAAAATGAACGTATCTATTGTGACCATTGTGCTACTTCATTTACTGATCTTTATCGAAGCTGCCCCGAGTGTTCCTTTGAAATCTGCCTCAACTGTTGCAAAGAAATCCGCAATGGAAGTATATCACCCCGGTCTGAAATGAAGTTTCAATATGTGAATAGGGGGTATGATTATATGCATGGTGGTAATCCATTACCAGTTTCTGGTAATTTAGGGACTTTAAGAGGTCATTTGATATTTACCAAATGGAAGGCCAACAATGATGGAAGTATTAGATGTGCACCCAAAGAAATGGGAGGATGTGGTGGCCCTGTGATGGAGCTGAAGCGCATTCTTTTAAATGGATGGATATCAGACTTGGAAGCCAAAGCTCATAACATGCTAAAAGGCTTTTCTAAAACTGAACAAACAACTCTTCAGAAAGAAGAAATATCAAGTTGCAATTCTAAGATAAGAGCAGCTTTTAGAGATGGCACAAGTGATAATAACTTATATTGTCCATCATCAAGTGACCTCATAAATGAAGGGCTGCTTCTCTTCAGAAAACATTGGACTCAAGGTGAACCAATCATAGTTCGTGATGTTCTTAAGCAGGGTACAGGTCTTAGTTGGGAGCCAATGGTCACATTGCGAGCCCTATCTGAAAACGTGGCTCCAGGAATCAGCTCAAATATGACTGAATTGAAGGCCATTGATTGCCTTTCTTGTTGTGAGGTAGAAATCAATACTCGTACATTCTTCAAGGGTTATACACAAGGAAGAACACATCAAAACCTGTGGCCAGAGATGCTGAAGTTAAAAGACTGGCCTCCCTCTGACAAGTTTGATGATCTTTTCCCTCGCCATTGTGACGAGTTTATCCGCTGCTTGCCATTTCAAGAGTATTGTGATCCTCGAGCTGGGATCCTCAACCTTGCTGTAAAGTTGCCATCCCATGTTCTAAAGCCAGACCTTGGTCCAAAAACATATATTGCTTATGGGATTAAAGAGGAACTTGGCAGGGGAGATTCAGTAACAAAACTTCACTATGATATGTCTGATGCTGTGAATATTTTGATCCACACGACTGAGGTAACATTGAGTAATGAACAAACTTCAGTTATTCCAAAACTAAAAAAAGCACACATGGCCCAAGATGAGAGAGAGGAACATGGTCGAGAAAGGGTCGATGAATGCCTGAATGAAGGACTTTGCAAAGACAACAGAGAAGAATATAACTGTGCTATTGCTAAAGAATCAGGTGGTGCTCTTTGGGACATCTTTCGGAGAGAGGATACTGAAAAGTTAGATGCATATCTAAGAAAGCACTCTAAGGAATTTAGGCATACCTATTGCTCTCGAGTTGAAGAGGTTGTCCATCCAATTAATGACCAATGCTTTTACTTGACTTTGGAACACAAGAAGAATCTGAAGAAGGAGTTTGGTGTAGAACCTTGGACTTTTGAGCAAAACCTTGGGGAGGCAGTATTTATTCCTGCTGGATGTGCACACCAAGTAAGGAATCTTAAGTCATGCACAAAAGTTGCTGTAGATTTCGTGTCCCCAGAAAATGTTCATATGTGCTTGCATTTAACTGAAGAGTTCCGTCGTCTTCCAAAGAATCACAAGGCCCGAGAAGATAAACTTGAGATACAGAAAATGATCGTCTATGCTGTTGATAATGCTGTCAAAGAATTAAAAGCTTTACGTTCTTAA 2013 0.3994 MSSVFEKGKGSVRTLYPNLIISDISHECPFCQNNCNCSVCLGSTGTIKTSNSSITNDEKVQHLQYMIDLLIPFIQHICEEQTQEHEIEAKIQGKSSSEIEIPQTSCENERIYCDHCATSFTDLYRSCPECSFEICLNCCKEIRNGSISPRSEMKFQYVNRGYDYMHGGNPLPVSGNLGTLRGHLIFTKWKANNDGSIRCAPKEMGGCGGPVMELKRILLNGWISDLEAKAHNMLKGFSKTEQTTLQKEEISSCNSKIRAAFRDGTSDNNLYCPSSSDLINEGLLLFRKHWTQGEPIIVRDVLKQGTGLSWEPMVTLRALSENVAPGISSNMTELKAIDCLSCCEVEINTRTFFKGYTQGRTHQNLWPEMLKLKDWPPSDKFDDLFPRHCDEFIRCLPFQEYCDPRAGILNLAVKLPSHVLKPDLGPKTYIAYGIKEELGRGDSVTKLHYDMSDAVNILIHTTEVTLSNEQTSVIPKLKKAHMAQDEREEHGRERVDECLNEGLCKDNREEYNCAIAKESGGALWDIFRREDTEKLDAYLRKHSKEFRHTYCSRVEEVVHPINDQCFYLTLEHKKNLKKEFGVEPWTFEQNLGEAVFIPAGCAHQVRNLKSCTKVAVDFVSPENVHMCLHLTEEFRRLPKNHKAREDKLEIQKMIVYAVDNAVKELKALRS* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02100 670 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 14 669 IPR045109 GO:0032454|GO:0033169
Phac6g02100 670 Gene3D Cupin 269 644 - -
Phac6g02100 670 SMART cupin_9 385 635 IPR003347 -
Phac6g02100 670 ProSiteProfiles JmjC domain profile. 404 635 IPR003347 -
Phac6g02100 670 FunFam Transcription factor jumonji domain-containing protein 267 644 - -
Phac6g02100 670 Pfam JmjC domain, hydroxylase 522 618 IPR003347 -
Phac6g02100 670 SUPERFAMILY Clavaminate synthase-like 285 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02100 Phac-Chr6 20808577 20812080 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Phac6g02100 JmjC 9.1e-13 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02100 K15601 K21989 gmx:100801772 1067.37