Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02099 ATGACCACACATTCAACCACAAAACCAAAAGCACACCATCTTTTCCTTCTCTTAATTCCGTTGTTAATTTCCACAAGAGTCAAAGGTAAGTGTGATTCTGGTTGCGACCTTGCTCTAGCTTCCTACTACATAAGCGAAGGCACGAACCTCACTTCCATTAGCACTCTTTTTGGAAAGCCCACATCGGAGATTCTCAAGTACAACCCAAGCGTGAAAGACCCCAACGTGATTAAAAGCCGAACAAGGATCAACGTCCCGTTCTCGTGTGAGTGCTTAAACAGTGTGTTTTTGGGACACACTTTCTCGTACCGGATCCAACACGGGAACACCTACAAGGTGGTTGCGGACTCTGTTTTCTCGAACCTGACCACCGAGGATTGGGTGAGCAGGGTCAACAGTTACCCGTCCAATAATATTCCCGACAACGTGAACATCAACGTTACCATCAACTGCTCCTGCGGAAACCGACATGTGTCTAAGCATTATGGGCTGTTTTTGACGTACCCGCTTCGGCTGGGTGATGACTTGAAACGGGTTGCGGCGGAATCCGGTGTGCCGGCGGAACTGCTGGTACGCTACAACCCCACCTCCGATTTCAGTTCTGGGAATGGACTCGTGTTCGTGCCGGCTAAAGATGAAAATGGAAACTTTCCACCTATGCTGCTGAGATCAGGAATATCTAGTGGAGCTATTGCTGGCATAGCCGTTGGAGGAGCTGCTGGGGTCTTAATTTTGGCACTTGTTCTATATGTTGGTCTACACAGAAGAAGGAAAGTGGCTGAGGTGTCCCTTCTCGCAGTACCAGGAGCATCTGAAGATCAGTGTAGTCCACTCTATCATGGTGTTGGTTTGGGAAGCAGCTTGGACAAGGCATCGGAATCTTCTGTTGTTGCTTCTCCAAGGTTGACAGGGATTACAGTGGACAAGTCAGTGGAGTTCTCATATGGGGAGCTAGACAAGGCCACTGATGGCTTTAGTGTGGCTAATATAATTGGTCAAGGTGGCTTTGGATCTGTTTACTATGCTGAGCTTCGGAGTGAGAAAGCTGCAATTAAAAAGATGGATATGCAAGCATCAAATGAATTCCTTGCAGAACTAAAGGTTCTAACGCATGTCCATCACTTGAACTTGGTGCGGTTAATCGGATATTGTGTTGAGGGCTCCTTATTTTTGGTTTATGAGTATATTGAGAACGGCAATTTAAGCCAACATTTGCGAGGCTCAGGGAGGGATCCGTTAACATGGGGAGCTAGAGTGCAAATTGCTCTTGATGCAGCAAGAGGATTGGAATACATCCATGAACATACAGTTCCAGTCTACATCCATAGAGATATAAAATCAGCAAACATTTTGATAGACAAAAACTTTCGCGCAAAGGTTGCAGATTTTGGTCTCACAAAATTGACTGAGTATGGTAGTTCTTCATTACACACGCGTCTTGTGGGTACCTTTGGTTATATGCCTCCAGAATATGCACAATATGGTGATGTTTCCTCCAAAGTAGACGTATATGCGTTTGGAGTTGTTCTCTATGAACTCATATCAGGCAAAGAAGCTATCGTCAAGACAAACGATCCTGAGAGTGAATCAAAAGGACTAGTCGCCTTGTTTGAAGAAGTTCTTGGTCTCTCAGATCCAAAAGAAAATCTTCGTCAACTTGTTGACCCTAGACTTGGTGACAACTACCTTCTTGACTCTGTATTTAAGGTATCTCAGCTTGCCAAAGCATGTACACATGAAAACCCTCAACTTAGGCCAAGCATGAGATCAATTGTTGTTGCCTTAATGACACTTTCATCTGCAACTGAGGATTGGGATGTTGGTTCCTTCTATGAAAACCAAGCTTTAGTGCACCTTATGTCTGGAAGGTAG 1872 0.4498 MTTHSTTKPKAHHLFLLLIPLLISTRVKGKCDSGCDLALASYYISEGTNLTSISTLFGKPTSEILKYNPSVKDPNVIKSRTRINVPFSCECLNSVFLGHTFSYRIQHGNTYKVVADSVFSNLTTEDWVSRVNSYPSNNIPDNVNINVTINCSCGNRHVSKHYGLFLTYPLRLGDDLKRVAAESGVPAELLVRYNPTSDFSSGNGLVFVPAKDENGNFPPMLLRSGISSGAIAGIAVGGAAGVLILALVLYVGLHRRRKVAEVSLLAVPGASEDQCSPLYHGVGLGSSLDKASESSVVASPRLTGITVDKSVEFSYGELDKATDGFSVANIIGQGGFGSVYYAELRSEKAAIKKMDMQASNEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRGSGRDPLTWGARVQIALDAARGLEYIHEHTVPVYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGSSSLHTRLVGTFGYMPPEYAQYGDVSSKVDVYAFGVVLYELISGKEAIVKTNDPESESKGLVALFEEVLGLSDPKENLRQLVDPRLGDNYLLDSVFKVSQLAKACTHENPQLRPSMRSIVVALMTLSSATEDWDVGSFYENQALVHLMSGR* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02099 623 Pfam Protein tyrosine and serine/threonine kinase 328 594 IPR001245 GO:0004672|GO:0006468
Phac6g02099 623 SMART LysM_2 41 86 IPR018392 -
Phac6g02099 623 ProSiteProfiles Protein kinase domain profile. 325 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02099 623 Gene3D Transferase(Phosphotransferase) domain 1 396 607 - -
Phac6g02099 623 SUPERFAMILY Protein kinase-like (PK-like) 305 595 IPR011009 -
Phac6g02099 623 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Phac6g02099 623 CDD STKc_IRAK 331 592 - -
Phac6g02099 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Phac6g02099 623 SMART serkin_6 325 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02099 623 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 15 609 IPR044812 GO:0019199|GO:0045087
Phac6g02099 623 FunFam LysM receptor kinase 2 304 395 - -
Phac6g02099 623 ProSiteProfiles LysM domain profile. 40 85 IPR018392 -
Phac6g02099 623 Gene3D Phosphorylase Kinase; domain 1 306 395 - -
Phac6g02099 623 Gene3D LysM domain 35 92 IPR036779 -
Phac6g02099 623 FunFam PTI1-like tyrosine-protein kinase 3 396 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02099 Phac-Chr6 20798102 20804001 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02099 16 623 Receptor kinase-like Gene Family AT3G21630 55.412 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Phac6g02099 PK_Tyr_Ser-Thr 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02099 - K13429 gmx:100802308 1061.6