LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac6g02095	ATGCCTGCTCCTCCTTCCCCTCTTTCTCCCTCCCTCGCTTTCATCTTCCTTGCTCTGCTTCCTCTTTCCCTTGCCAACACTGACCCTTCTGATGTTCAAGCTCTCGAGGTTATGTACAATGCGTTGAATAGTTCAACTCAGTTAACGGGTTGGAGAATCGGCGGTGGTGATCCATGTGGAGAGTCATGGAAAGGGGTGACATGTGAAGGTTCAGCCGTTGTTTCCATTGAGCTCTCAGGATTAGGACTCGATGGGACTCTGGGGTACCTGCTTTCGAACCTAATGTCACTCAGAAAGCTTGACTTGAGTGACAACAAGATCCATGATACAATACCCTACCAGTTGCCGCCAAATCTTACAAGCCTGAATCTTGCAAGAAATAATTTATCTGGAAATCTTCCTTATTCCTTTTCTGCCATGGTTTCTCTCAATTATTTGAATTTAAGCAATAATGCACTCTCCATGACAGTTGGCGATGTTTTTGCTAGTCTTTCAGATCTTGGTATCCTGGATCTATCATTCAATAACTTCTCTGGGGATCTTCCTCCTTCATTTAGTGCATTGACCAATCTTTCTTCTCTTTTCTTGCAGAAAAACCAGATGACTGGCTCTCTTAGTGTTCTAGTTGGTTTGCCTTTGGATACTTTAAATGTTGCAAACAATAATTTCAGTGGATGGATACCTCGTGAGATTAGTTCCATACATCATTTCATATATGATGGAAATTCATTTGAGAACACTCCTGCTCCTCTTCCACCGGCATTAACTTCACCTCCTCCCAGTGGATCTCACAGTCACCATCATTCTGGATCTGGTTCACACAATACAACAGAAGCCTCTGATAATGAAAATTCTGATGATCATACGGGTTTGACAGTGGGGGCTGTTATTGGCATTGTGTTAGGTTCAGTTGTGGTGGCTGGTATTGTGCTGCTTGCTCTTGTTTTCTTCATCCAAAAGCGAAAGGGGAAGAAAACAGGTGCAGGGAATTTTAGTGGGAGCCTTCCTCATGGAGTAATTAATGTAACTCCTCAGATGCAAGAGCAGAGAGTAAAAAGCGCTGCTGTAGTTACAGATCTCAAGCCTCGTCCAGCAGAAAATGTATCAGTTGAGAGATTACCTGCAAAAAGTGGATCTGTGAGGCACATGAAGTCCCCTATAACCTCAACATCGTACACAGTTGCTTCTCTCCAAAGTGCAACAAATAGCTTTAGTCAAGAATTTATAATTGGTGAAGGTTCTCTTGGCCGAGTTTACAAGGCTGATTTCCCAAATGGGAAGGAAATGGCTATCAAGAAGATTGACAACTCTGCACTGTCATTACAAGAGGAAGACAATTTTCTTGAAGCTGTTTCAAATATGTCACGCCTGCGGCACCCAAACATTGTGACATTGACTGGATATTGTGCTGAGCACGGCCAACGACTTCTAGTTTACGAGTATATTGGAAATGGAAATCTGCATGACATGCTCCATTTTGCTGAAGATAGCAGTGGCAAGGATTTGTCTTGGAATGCTCGTGTACGCATAGCACTTGGCACAGCCCGGGCTTTAGAGTATTTGCATGAAGTGTGCTTGCCTTCAGTTGTACATAGAAATTTCAAATCAGCAAATATATTACTTGATGAGGAGCTAAATCCTCACCTGTCTGACTGTGGTTTAGCTGCTTTGACACCAAACACAGAGAGGCAGGTATCAACTCAGATGGTCGGTTCATTTGGTTACAGTGCTCCTGAGTTTGCATTATCAGGAGTATACACTGTAAAAAGTGATGTTTACAGCTTTGGGGTGGTTATGCTGGAATTGTTGACTGGTCGGAAGCCACTAGACAGTTCGCGAATTCGATCAGAGCAGTCACTTGTGAGGTGGGCTACACCCCAACTCCATGATATAGATGCCTTGGCGAAAATGGTGGATCCTACTTTGAATGGCATGTATCCTGCAAAGTCACTGTCACGCTTTGCTGATATCATTGCCCTCTGTGTTCAGCCGGAACCTGAATTTCGACCTCCAATGTCTGAGGTGGTGCAAGCATTGGTCCGGCTAGTGCAAAGAGCAAGTGTGGTTAAAAGACGACCCAGTGACGAATCTGGCACTGGTCACAAGACCCCAGAACATGAGGCCATAGACATGTCATTTTAA	2142	0.4398	MPAPPSPLSPSLAFIFLALLPLSLANTDPSDVQALEVMYNALNSSTQLTGWRIGGGDPCGESWKGVTCEGSAVVSIELSGLGLDGTLGYLLSNLMSLRKLDLSDNKIHDTIPYQLPPNLTSLNLARNNLSGNLPYSFSAMVSLNYLNLSNNALSMTVGDVFASLSDLGILDLSFNNFSGDLPPSFSALTNLSSLFLQKNQMTGSLSVLVGLPLDTLNVANNNFSGWIPREISSIHHFIYDGNSFENTPAPLPPALTSPPPSGSHSHHHSGSGSHNTTEASDNENSDDHTGLTVGAVIGIVLGSVVVAGIVLLALVFFIQKRKGKKTGAGNFSGSLPHGVINVTPQMQEQRVKSAAVVTDLKPRPAENVSVERLPAKSGSVRHMKSPITSTSYTVASLQSATNSFSQEFIIGEGSLGRVYKADFPNGKEMAIKKIDNSALSLQEEDNFLEAVSNMSRLRHPNIVTLTGYCAEHGQRLLVYEYIGNGNLHDMLHFAEDSSGKDLSWNARVRIALGTARALEYLHEVCLPSVVHRNFKSANILLDEELNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGVYTVKSDVYSFGVVMLELLTGRKPLDSSRIRSEQSLVRWATPQLHDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRPSDESGTGHKTPEHEAIDMSF*	714

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Phac6g02095	713	CDD	STKc_IRAK	410	682	-	-
Phac6g02095	713	ProSiteProfiles	Leucine-rich repeat profile.	96	117	IPR001611	GO:0005515
Phac6g02095	713	Pfam	Leucine rich repeat	117	177	IPR001611	GO:0005515
Phac6g02095	713	SUPERFAMILY	Protein kinase-like (PK-like)	381	679	IPR011009	-
Phac6g02095	713	Pfam	Leucine rich repeat N-terminal domain	29	68	IPR013210	-
Phac6g02095	713	FunFam	Protein STRUBBELIG-RECEPTOR FAMILY 8	369	481	-	-
Phac6g02095	713	Gene3D	Ribonuclease Inhibitor	28	277	IPR032675	-
Phac6g02095	713	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	17	683	IPR046959	-
Phac6g02095	713	MobiDBLite	consensus disorder prediction	690	713	-	-
Phac6g02095	713	Gene3D	Phosphorylase Kinase; domain 1	366	481	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac6g02095	Phac-Chr6	20775824	20782933	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac6g02095	140	713	Strubbelig Receptor Gene Family	AT4G22130	70.261	0.0	795

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-V	Phac6g02095		Pkinase	1.6e-44	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac6g02095	-		-	gmx:100781455	1185.63

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