Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02091 ATGTGCAAGCAAGCCATGGAGGGTAGTAGTAGTTCTAATGGCACTTCTTATTTGTTGGCTTTTGGAGAAAACAGTGGTGGGCTATGCCCAATGACGATGATGCCTTTGGTGACTTCCCATCATGCTGGTCATCATCCAATAAATCCCAATCCTAGTAATAATACCAATAATAATGCAAACACAAACTGTCTCTTCATTCCCAACTGCAGTAACAGTGGAACTCCTTCTATCATGCTCGACAATAACCACAACAACAACGACGATAACAACAACACTGGGGTAGGGTACTATTTCATGGAGAGTGGCCACCACAACCACCGCAACAACAACAATGGAAGCTCCTCCTCTTCTTCCTCTTCTGCTGTCAAGGCCAAGATCATGGCCCATCCTCACTATCACCGTCTCTTGGCAGCTTACGTCAACTGTCAGAAGGTTGGAGCCCCGCCTGAAGTGGTTACCAGGTTAGAGGAATCATGTGCTTCTGCGGTGACAATGGTAGGAGATGCAGCTGGATCCAGCTGCTTAGGTGAAGATCCAGCTCTGGATCAGTTCATGGAAGCTTACTGCGAGATGCTCACCAAGTACGAGCAAGAACTCTCCAAACCCTTAAAGGAAGCCATGCTCTTCCTTCAAAGGATTGAGTGTCAGTTCAAAAATCTCACTATTTCTTCCTCCGACTTCGGTTGTAATGAAGGTGGTGATAGGAATGGATCATCTGAAGAGGATGTTGATGTACAGAGCATGATAGATCCCCAGGCAGAGGACAGGGAATTAAAGGGTCAGCTTCTGCGCAAGTACAGTGGATACTTGGGCAGTCTGAAGCAGGAGTTCATGAAAAAGAGGAAAAAAGGAAAGCTACCTAAAGAAGCAAGGCAACAATTGCTTGAATGGTGGAGCAGACATTACAAATGGCCTTATCCATCCGAATCACAGAAGCTGGCTCTTGCAGAGTCCACAGGTCTGGATCAGAAGCAAATCAACAACTGGTTTATTAATCAAAGGAAACGGCACTGGAAGCCTTCAGAGGACATGCAGTTTGTGGTGATGGATCCAACCCATCCACACTATTACGTAGATACTGTTCTGGCCAATCCATTTCCCATGGATCTCTCCCATCCCATGCTCTAG 1128 0.4628 MCKQAMEGSSSSNGTSYLLAFGENSGGLCPMTMMPLVTSHHAGHHPINPNPSNNTNNNANTNCLFIPNCSNSGTPSIMLDNNHNNNDDNNNTGVGYYFMESGHHNHRNNNNGSSSSSSSSAVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVTRLEESCASAVTMVGDAAGSSCLGEDPALDQFMEAYCEMLTKYEQELSKPLKEAMLFLQRIECQFKNLTISSSDFGCNEGGDRNGSSEEDVDVQSMIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLEWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDPTHPHYYVDTVLANPFPMDLSHPML* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02091 375 MobiDBLite consensus disorder prediction 98 122 - -
Phac6g02091 375 ProSiteProfiles ELK domain profile. 257 277 IPR005539 GO:0003677
Phac6g02091 375 ProSitePatterns 'Homeobox' domain signature. 315 338 IPR017970 GO:0000981|GO:0006355
Phac6g02091 375 Pfam KNOX2 domain 175 221 IPR005541 GO:0003677|GO:0005634
Phac6g02091 375 Pfam ELK domain 257 278 IPR005539 GO:0003677
Phac6g02091 375 SUPERFAMILY Homeodomain-like 279 354 IPR009057 -
Phac6g02091 375 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 91 346 - -
Phac6g02091 375 Pfam KNOX1 domain 121 160 IPR005540 GO:0003677|GO:0005634
Phac6g02091 375 SMART ELK_2 257 278 IPR005539 GO:0003677
Phac6g02091 375 FunFam Homeobox protein knotted-1-like 2 282 344 - -
Phac6g02091 375 Gene3D - 282 344 - -
Phac6g02091 375 SMART KNOX1_2 120 164 IPR005540 GO:0003677|GO:0005634
Phac6g02091 375 CDD homeodomain 289 341 IPR001356 GO:0003677
Phac6g02091 375 ProSiteProfiles 'Homeobox' domain profile. 277 340 IPR001356 GO:0003677
Phac6g02091 375 MobiDBLite consensus disorder prediction 103 122 - -
Phac6g02091 375 Pfam Homeobox KN domain 297 336 IPR008422 GO:0003677|GO:0006355
Phac6g02091 375 SMART KNOX2_2 171 222 IPR005541 GO:0003677|GO:0005634
Phac6g02091 375 SMART HOX_1 279 344 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02091 Phac-Chr6 20753664 20761353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02091 96 375 Homeobox Transcription Factor Family AT1G62360 76.207 4.05e-133 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Phac6g02091 KNOX2 7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02091 - - gmx:100805837 631.328