Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02087 ATGGAGCGTTTGGCCAGGTCAGCTCGACTGTGGCGTTGGCATTGGCGTTCGTTTTCCTCTTTCCAAACCCTAACTTCTCGCTCCTCCCCTCTTTCTACATACCCCAAATTTGCGTCTTCCTGGTTTGCCTCTTCCGATGTTTCGAGGTCCAGAGTCTTGCGCGAGGACTATTCCTTGCTTCCGGTTTTTTTAGCTGGTGTTTTTGGATCTGGATTGGTGGGAGTGGCTTATGCGGATAATGGTGCTGTGGATGTCCAAGAAAGAGCCAAGAATGAACGCCAGCGAATTGAGGAGTTGATGAGAATTAGAGGAATTCGATACGGTTCCTATCCTTCCTTCTCTGTTGCTGTTAAAGGCCAAAAGGTCAGTATTAAGTTTCAAATTCCTCATGGTTGTGAAATTTCACAACTTATTGCAAATCTTACTGCCAATCTTGGAACGAAAGCTGAAGGCCATGGAGGTGGTTCAGACATGTTATTACGAGCTTGGAACGGCCCAGTTGCTTGGCAACTTACTCTTACTCATCCATCAGAACAAAAACATATTCCAGGGAATGATATGTCTTCAAAAGATATAAGTGCAGATGATACAGATCTATGTATACTCATATTTCATTCTCTCGTTGGCTTAGATAAAGCTGAGATTGAATTCATTAAGCAAGGGGAATTGAGTCCTGAAGAACTTGATGCGTTCATCTCTGTTTTACAATTAGCTGGTAACATGTTGGGACAAAAAAGCACCCTGGAAAGAAAACCAAAAGAAGAGACTGGAAAGCTGCCATCTGTAGATAAATCTATTTCTGATCTTGAGGGTATGGGAGTGAGAATTTATGGACTTGATGAACCCGTAGGTATATCAAAAGATGGTGAGCGTGAGATATCATGGGACAACATTGCTGGTTATGAACATCAAAAACGATTAATAGAAGATACAATACTATTGGCATTGCATAGTCCTGAAGTTTATGATGATATTGCTCGAGGGACTCGTCATAAGTTTGAGTCAAACAGACCTCGAGCTGTGCTATTTGAAGGTCCACCTGGTACAGGAAAAACATCCTGTGCTCGTGTTATTGCCAATCAAGCGGGCGTCCCTTTGCTATATGTTCCACTTGAGGCAATAATGTCAGAGTTCTATGGTAAGAGTGAACGCCTTCTAGGGAAAGTGTTTTCTCTTGCAAACAATCTTCCGAATGGTGCTATTATATTTCTAGACGAGATTGATTCTTTTGCTGCTGCACGTGACAGTGAAATGCATGAAGCTACACGTAGAATATTGTCAGTCTTGTTGAGACAGATAGATGGCTTTGAGCAGGATAAGAAAGTAGTAGTCATTGCTGCCACAAATAGAAAGGAAGACCTTGATCCCGCATTAATCAGTCGGTTTGATAGTATGATCGCTTTTGGCTTACCTGATCATCGGAATCGTCAGGAAATAGCATCCAAATATGCAAAGCACCTGTCCAAACCCGAACTAGATGAATTTGCAAACGTTACAGAAGACATGTCTGGAAGAGATATTAGAGATGTTTGTCAGCAAGCAGAACGATCGTGGGCGTCAAAGATTATTCGAGGGCAAGTTTCTAAAGAGGGGGAAAGAGCGAAGCTTCCAGCATTGCAAGAATATATAAAATGCGCCAGGAGTAGACAGGAGGCGCTGCGTAGTGCTGCCGCAAACAGGAAGTTCCCAAGTTCTTCCCACCCCAAGATACTTAGCGACTGA 1722 0.4297 MERLARSARLWRWHWRSFSSFQTLTSRSSPLSTYPKFASSWFASSDVSRSRVLREDYSLLPVFLAGVFGSGLVGVAYADNGAVDVQERAKNERQRIEELMRIRGIRYGSYPSFSVAVKGQKVSIKFQIPHGCEISQLIANLTANLGTKAEGHGGGSDMLLRAWNGPVAWQLTLTHPSEQKHIPGNDMSSKDISADDTDLCILIFHSLVGLDKAEIEFIKQGELSPEELDAFISVLQLAGNMLGQKSTLERKPKEETGKLPSVDKSISDLEGMGVRIYGLDEPVGISKDGEREISWDNIAGYEHQKRLIEDTILLALHSPEVYDDIARGTRHKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLLYVPLEAIMSEFYGKSERLLGKVFSLANNLPNGAIIFLDEIDSFAAARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKEDLDPALISRFDSMIAFGLPDHRNRQEIASKYAKHLSKPELDEFANVTEDMSGRDIRDVCQQAERSWASKIIRGQVSKEGERAKLPALQEYIKCARSRQEALRSAAANRKFPSSSHPKILSD* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02087 573 CDD RecA-like_protease 326 468 - -
Phac6g02087 573 Gene3D - 471 540 - -
Phac6g02087 573 MobiDBLite consensus disorder prediction 554 573 - -
Phac6g02087 573 ProSitePatterns AAA-protein family signature. 442 461 IPR003960 GO:0005524|GO:0016887
Phac6g02087 573 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 289 516 - -
Phac6g02087 573 SMART AAA_5 337 472 IPR003593 GO:0016887
Phac6g02087 573 Coils Coil 82 102 - -
Phac6g02087 573 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 291 517 IPR027417 -
Phac6g02087 573 MobiDBLite consensus disorder prediction 559 573 - -
Phac6g02087 573 Gene3D - 292 470 IPR027417 -
Phac6g02087 573 Pfam ATPase family associated with various cellular activities (AAA) 341 469 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02087 Phac-Chr6 20720217 20725996 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02087 337 537 Calmodulin-binding Proteins AT3G56690 35.577 2.32e-27 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02087 - - gmx:100803362 987.638