Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02070 ATGACTGTATGTTCTGACAATCTTCATATCATTGTTCACAAACACACTTGTTTTCTAGATTCAATGGCGGGGTCATGTTTCCACGGACTAAGGCTAAGGATGTCTAAGAGTAAACCTTTACTTTCATCTTCCTCCAAGTCACGGTTGGAGAATGACACGGAGAACATGGAAAGGAAGAGATTTAATAGCACGGAATCGTGGTCCATGATATTGGACTCAATGGATACATGGGAGGCTTCGAAGGAAGACCAGGAGGGGGAGCAAGAGGAATGGACTGCAGACCTATCACAGCTTTTTATTGGTAACAAGTTTGCTTCTGGAGCTCACAGTCGAATTTACCGTGGAGTCTACAAGCAGAGAGCTGTTGCTGTGAAAATGGTGAGGATGCCAAGCCAGGATGAGGAGAAAAAGGACTTATTAGAGGAGCAATTTAACTCTGAAGTGGCTTTACTTTCACGTCTCTTCCATTTTAACATAGTGCAGTTTATTGCAGCATGCAAAAAACCGCCCGTGTACTGTATCATAACAGAATACATGTCACAAGGGAATCTGAGAATGTATCTGAACAAGAAAGAGCCATACTCACTCTCAATGGAAACAATACTAAGGTTGGCTCTAGATATATCAAGGGGCATGGAGTACCTTCATTCACAAGGTGTGATTCACAGAGACTTGAAGTCAAGTAATTTGCTCCTGGATGATGATATGAGGGTTAAGGTGGCGGATTTTGGCACATCTTGTCTTGAAACAAGATGCCGGAAAAGCAAAGGGAACTCGGGAACATATCGTTGGATGGCACCAGAGATGATTAAGGAAAAACCTTACACCCGAAAAGTTGATGTGTACAGTTTTGGTATTGTGCTTTGGGAGCTCACTACTTCTCTACTTCCTTTCCAAGGAATGACCCCAGTGCAAGCTGCTTTTGCTGTGGCAGAGAAGAATGAAAGGCCTCCTCTGCCAGCTAGTTGTGAACCAGCAGTAGCACATCTGATAAAGCGTTGTTGGTCAGCAAACCCCTCGAAACGGCCAGATTTCAGTGATATTGTGTCTACTTTGGAGAAATACGATGAGTGTCTGAAGGAGGGCCTACCAATGAGCCATCATCATTCAGGGCTAGTCACCAGAAATGTAATCGTTGAACGCCTAAAAGGCTGTGTATCATTGAGCTCCTCCATACCTGTGTATGCTTGA 1191 0.4391 MTVCSDNLHIIVHKHTCFLDSMAGSCFHGLRLRMSKSKPLLSSSSKSRLENDTENMERKRFNSTESWSMILDSMDTWEASKEDQEGEQEEWTADLSQLFIGNKFASGAHSRIYRGVYKQRAVAVKMVRMPSQDEEKKDLLEEQFNSEVALLSRLFHFNIVQFIAACKKPPVYCIITEYMSQGNLRMYLNKKEPYSLSMETILRLALDISRGMEYLHSQGVIHRDLKSSNLLLDDDMRVKVADFGTSCLETRCRKSKGNSGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTSLLPFQGMTPVQAAFAVAEKNERPPLPASCEPAVAHLIKRCWSANPSKRPDFSDIVSTLEKYDECLKEGLPMSHHHSGLVTRNVIVERLKGCVSLSSSIPVYA* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02070 396 SUPERFAMILY Protein kinase-like (PK-like) 75 352 IPR011009 -
Phac6g02070 396 FunFam Serine/threonine-protein kinase isoform 1 88 180 - -
Phac6g02070 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Phac6g02070 396 PRINTS Tyrosine kinase catalytic domain signature 176 189 IPR001245 GO:0004672|GO:0006468
Phac6g02070 396 PRINTS Tyrosine kinase catalytic domain signature 279 301 IPR001245 GO:0004672|GO:0006468
Phac6g02070 396 PRINTS Tyrosine kinase catalytic domain signature 260 270 IPR001245 GO:0004672|GO:0006468
Phac6g02070 396 PRINTS Tyrosine kinase catalytic domain signature 323 345 IPR001245 GO:0004672|GO:0006468
Phac6g02070 396 PRINTS Tyrosine kinase catalytic domain signature 214 232 IPR001245 GO:0004672|GO:0006468
Phac6g02070 396 Pfam Protein tyrosine and serine/threonine kinase 100 352 IPR001245 GO:0004672|GO:0006468
Phac6g02070 396 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 91 355 - -
Phac6g02070 396 Gene3D Transferase(Phosphotransferase) domain 1 181 376 - -
Phac6g02070 396 ProSiteProfiles Protein kinase domain profile. 98 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02070 396 CDD STKc_MAP3K-like 105 352 - -
Phac6g02070 396 SMART serkin_6 98 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02070 396 FunFam serine/threonine-protein kinase HT1 181 374 - -
Phac6g02070 396 Gene3D Phosphorylase Kinase; domain 1 87 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02070 Phac-Chr6 20570958 20576024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02070 22 387 MAP Kinase Kinase Kinase AT1G62400 77.573 0.0 604
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Phac6g02070 PK_Tyr_Ser-Thr 2.8e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02070 - - gmx:100810171 664.84