Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02023 ATGCCTGGAATTAATGTCAGTAATAGAATTTTACCTGATAAAATGATTTCTAGGAAACTAAAATTCCAAAGTTCGGATATTGAATGGTCAGGCATTACTTGGTTTTGTGCTAAACAGCTGAAGCACTACTCAGGGTTTTGCAGGAATGGAACAACCATAAATGTTCATTCATTTGTATACATTATGGCTGAAGAAGAAAACCACTATCTTGGTTACTTGGAAGATATGTATGAAGACAAGAAGAGACAAAAAAAGGTGAAGGTACGTTGGTTTCATCATGGTCAGGAAGTTAAGCAGGTGATTCCACAGCTGAATCTGCAAGAGGGAGAGGTTTTCATCACACCTCATGTTCAGGTGATCAGTGCTGAGTGTGTCAATGGTCCTGCAACTGTTTTGACTCCGAAGCATTATGAGAAATACCTGACTGCTGTGCCTCATACCTCTTTATCTGAGATACATACATGCTTTAGGCAGTTTAAAAACAATAGGCTTAAGCCCTTCACACTTACAAAGTTGCGTGGATATAGTAACCAGCCTGTTCTTTCTTGTTTAAATAGTCCTATTCTCTCCAAGAGAAAGGCAAAGTGTGAAAAGTCACACACAGATGATGATGATGATGAGAACTTCACTCAAGATGATCCTTTAAGGTCCAGCAATAAGAGGATTAGAAGTTCTAAGGATCAAATATTTGAGAAGGGTTTTTCTGGTCTGCAAGTCTCTGCTCCTACCAATGAAATGACAAAATGTGGACTAAAATATCCTAGTTTAAAATTAAAACTATCAAGAAAAACAGTGGGTATTAAGGTTATTGGACCAAAGCCTAAACTTTCTTTTCAGGTTGGTGCTAAGATAGAGGTTCTTTGTCAAGATAGTGGCATTAGAGGATGCTGGTTTAGATGTAAAATCTTGAGTGTGTCTCCGAGGCTTCTGAAGGTCCAGTATGATAATTTGGTTGATATAGAGGGACCACAGAACCTAGAGGAATGGGTCCCTGCATCTAGAGTGGCAGCTACTGATAAATTGGGTATGCGATGTTCAGGCCGCTTAACAGTCAGGCCATGCCCTCCTGAATACAATTCAAGTCGTACTTTTGAGATTGGAGCAGCAGTGGATGCCTGGTGGTGTGATGGATGGTGGGAAGGTGTCGTAACTGCAGTTAATGTCAGTGGAGATGGAATCCTGCAAGTTTATACCCCTGGTGAAGAGAGGTTCCTAAAGGTTGAGCAGAAGAACATTCGGATTTCCCGAGACTGGATCAATAACAGATGGATTGATATACAAGGAAAGGCTGACATTTGTAGTTATTTAACTTTAAATGTCAGGTCCAGCATCGGGATGTCAGCTAATTCTGCAGTGGTAGATGGATCTTTGTCTGATTGCTCTGCTTTAGAAAGTAAATCATCATCAATTCCCAAAATTGAAGTTGCTAAGAAGGTTGAGCCAGAATCGTTTGGTTTGGAAATCCCTGTTGATCTGGAAAATATGAAGGGAATAACTCTGAGGGAGCCACTCTATGCCATTCACGAGGACAAGGATAACAACTCTGGTGGTGGCTGTGATGATGAAGCTGACAAGGCTGTGAAGACACTTCTGGCCTTAAATGAACACAAGGATAATAACTCTTGTAGAGACAGTGATGATGACACTGAGGATGATGATAATGTCAATGGTGATGATGTTGACAATGAGGAGGCCAGTGAAGAAAATTTTGATTGTTGTGAACCAAAAATTGATGCAGCAGAAGCAATACAAGTTGCATGA 1761 0.4043 MPGINVSNRILPDKMISRKLKFQSSDIEWSGITWFCAKQLKHYSGFCRNGTTINVHSFVYIMAEEENHYLGYLEDMYEDKKRQKKVKVRWFHHGQEVKQVIPQLNLQEGEVFITPHVQVISAECVNGPATVLTPKHYEKYLTAVPHTSLSEIHTCFRQFKNNRLKPFTLTKLRGYSNQPVLSCLNSPILSKRKAKCEKSHTDDDDDENFTQDDPLRSSNKRIRSSKDQIFEKGFSGLQVSAPTNEMTKCGLKYPSLKLKLSRKTVGIKVIGPKPKLSFQVGAKIEVLCQDSGIRGCWFRCKILSVSPRLLKVQYDNLVDIEGPQNLEEWVPASRVAATDKLGMRCSGRLTVRPCPPEYNSSRTFEIGAAVDAWWCDGWWEGVVTAVNVSGDGILQVYTPGEERFLKVEQKNIRISRDWINNRWIDIQGKADICSYLTLNVRSSIGMSANSAVVDGSLSDCSALESKSSSIPKIEVAKKVEPESFGLEIPVDLENMKGITLREPLYAIHEDKDNNSGGGCDDEADKAVKTLLALNEHKDNNSCRDSDDDTEDDDNVNGDDVDNEEASEENFDCCEPKIDAAEAIQVA* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02023 586 ProSiteProfiles BAH domain profile. 51 170 IPR001025 GO:0003682
Phac6g02023 586 Pfam Agenet domain 281 356 IPR008395 -
Phac6g02023 586 SMART agenet_At_2 276 341 IPR014002 -
Phac6g02023 586 SMART agenet_At_2 362 420 IPR014002 -
Phac6g02023 586 MobiDBLite consensus disorder prediction 537 576 - -
Phac6g02023 586 MobiDBLite consensus disorder prediction 545 568 - -
Phac6g02023 586 Pfam BAH domain 52 145 IPR001025 GO:0003682
Phac6g02023 586 MobiDBLite consensus disorder prediction 199 222 - -
Phac6g02023 586 Gene3D - 18 167 IPR043151 -
Phac6g02023 586 CDD Tudor_Agenet_AtDUF_rpt1_3 278 356 - -
Phac6g02023 586 SMART BAH_4 51 170 IPR001025 GO:0003682
Phac6g02023 586 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 276 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02023 Phac-Chr6 20296814 20303402 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02023 290 418 PHD Transcription Factor Family AT5G58610 27.820 4.11e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02023 - - vun:114188137 1058.51