Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02022 ATGTCTGGTGGGGAGGTAGGTGGTGGGAGTGTTTTTGTGGCTTGGGAGGAGCAGGTGATATGCCAGGAGCGTGGTAACCGAGTGATTCACTTCTATTTGAAGGATGCGTTGGGGAATTCAGTGCTGGCAGTTGTGGGGACCGAGAGGAGTGTGAGACACATGATGTATGTTGTCCCTGACCATTTCTTGCAGGCCTATGGATCCACTCAGCCCATCAATGCTTGCAAATGGAGGGCGAGGCGAGAGGTTGTTGATTGGCTTACTTGTTTGGTCTCCCGGAATCGGTCACACCATGCAGGTGTACAATTGGATGATTTAGTACAAGCTGATGAATCTCTCAAGATTTTAATGCCTGGAATTAATGTCAGTAATAGAATTTTACCTGATAAAATGATTTCTAGGAAACTAAAATTCCAAAGTTCGGATATTGAATGGTCAGGCATTACTTGGTTTTGTGCTAAACAGCTGAAGCACTACTCAGGGTTTTGCAGGAATGGAACAACCATAAATGTTCATTCATTTGTATACATTATGGCTGAAGAAGAAAACCACTATCTTGGTTACTTGGAAGATATGTATGAAGACAAGAAGAGACAAAAAAAGGTGAAGGTACGTTGGTTTCATCATGGTCAGGAAGTTAAGCAGGTGATTCCACAGCTGAATCTGCAAGAGGGAGAGGTTTTCATCACACCTCATGTTCAGGTGATCAGTGCTGAGTGTGTCAATGGTCCTGCAACTGTTTTGACTCCGAAGCATTATGAGAAATACCTGACTGCTGTGCCTCATACCTCTTTATCTGAGATACATACATGCTTTAGGCAGTTTAAAAACAATAGGCTTAAGCCCTTCACACTTACAAAGTTGCGTGGATATAGTAACCAGCCTGTTCTTTCTTGTTTAAATAGTCCTATTCTCTCCAAGAGAAAGGCAAAGTGTGAAAAGTCACACACAGATGATGATGATGATGAGAACTTCACTCAAGATGATCCTTTAAGGTCCAGCAATAAGAGGATTAGAAGTTCTAAGGATCAAATATTTGAGAAGGGTTTTTCTGGTCTGCAAGTCTCTGCTCCTACCAATGAAATGACAAAATGTGGACTAAAATATCCTAGTTTAAAATTAAAACTATCAAGAAAAACAGTGGGTATTAAGGTTATTGGACCAAAGCCTAAACTTTCTTTTCAGGTTGGTGCTAAGATAGAGGTTCTTTGTCAAGATAGTGGCATTAGAGGATGCTGGTTTAGATGTAAAATCTTGAGTGTGTCTCCGAGGCTTCTGAAGGTCCAGTATGATAATTTGGTTGATATAGAGGGACCACAGAACCTAGAGGAATGGGTCCCTGCATCTAGAGTGGCAGCTACTGATAAATTGGGTATGCGATGTTCAGGCCGCTTAACAGTCAGGCCATGCCCTCCTGAATACAATTCAAGTCGTACTTTTGAGATTGGAGCAGCAGTGGATGCCTGGTGGTGTGATGGATGGTGGGAAGGTGTCGTAACTGCAGTTAATGTCAGTGGAGATGGAATCCTGCAAGTTTATACCCCTGGTGAAGAGAGGTTCCTAAAGGTTGAGCAGAAGAACATTCGGATTTCCCGAGACTGGATCAATAACAGATGGATTGATATACAAGGAAAGGCTGACATTTGTAGTTATTTAACTTTAAATGTCAGGTCCAGCATCGGGATGTCAGCTAATTCTGCAGTGGTAGATGGATCTTTGTCTGATTGCTCTGCTTTAGAAAGTAAATCATCATCAATTCCCAAAATTGAAGTTGCTAAGAAGGTTGAGCCAGAATCGTTTGGTTTGGAAATCCCTGTTGATCTGGAAAATATGAAGGGAATAACTCTGAGGGAGCCACTCTATGCCATTCACGAGGACAAGGATAACAACTCTGGTGGTGGCTGTGATGATGAAGCTGACAAGGCTGTGAAGACACTTCTGGCCTTAAATGAACACAAGGATAATAACTCTTGTAGAGACAGTGATGATGACACTGAGGATGATGATAATGTCAATGGTGATGATGTTGACAATGAGGAGGCCAGTGAAGAAAATTTTGATTGTTGTGAACCAAAAATTGATGCAGCAGAAGCAATACAAGTTGCATGA 2109 0.4196 MSGGEVGGGSVFVAWEEQVICQERGNRVIHFYLKDALGNSVLAVVGTERSVRHMMYVVPDHFLQAYGSTQPINACKWRARREVVDWLTCLVSRNRSHHAGVQLDDLVQADESLKILMPGINVSNRILPDKMISRKLKFQSSDIEWSGITWFCAKQLKHYSGFCRNGTTINVHSFVYIMAEEENHYLGYLEDMYEDKKRQKKVKVRWFHHGQEVKQVIPQLNLQEGEVFITPHVQVISAECVNGPATVLTPKHYEKYLTAVPHTSLSEIHTCFRQFKNNRLKPFTLTKLRGYSNQPVLSCLNSPILSKRKAKCEKSHTDDDDDENFTQDDPLRSSNKRIRSSKDQIFEKGFSGLQVSAPTNEMTKCGLKYPSLKLKLSRKTVGIKVIGPKPKLSFQVGAKIEVLCQDSGIRGCWFRCKILSVSPRLLKVQYDNLVDIEGPQNLEEWVPASRVAATDKLGMRCSGRLTVRPCPPEYNSSRTFEIGAAVDAWWCDGWWEGVVTAVNVSGDGILQVYTPGEERFLKVEQKNIRISRDWINNRWIDIQGKADICSYLTLNVRSSIGMSANSAVVDGSLSDCSALESKSSSIPKIEVAKKVEPESFGLEIPVDLENMKGITLREPLYAIHEDKDNNSGGGCDDEADKAVKTLLALNEHKDNNSCRDSDDDTEDDDNVNGDDVDNEEASEENFDCCEPKIDAAEAIQVA* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02022 702 MobiDBLite consensus disorder prediction 661 684 - -
Phac6g02022 702 MobiDBLite consensus disorder prediction 653 692 - -
Phac6g02022 702 Pfam Agenet domain 397 472 IPR008395 -
Phac6g02022 702 SMART agenet_At_2 392 457 IPR014002 -
Phac6g02022 702 SMART agenet_At_2 478 536 IPR014002 -
Phac6g02022 702 Gene3D - 134 283 IPR043151 -
Phac6g02022 702 SMART BAH_4 167 286 IPR001025 GO:0003682
Phac6g02022 702 CDD Tudor_Agenet_AtDUF_rpt1_3 394 472 - -
Phac6g02022 702 MobiDBLite consensus disorder prediction 315 338 - -
Phac6g02022 702 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 392 570 - -
Phac6g02022 702 Pfam BAH domain 168 261 IPR001025 GO:0003682
Phac6g02022 702 ProSiteProfiles BAH domain profile. 167 286 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02022 Phac-Chr6 20294523 20303402 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02022 406 534 PHD Transcription Factor Family AT5G58610 27.820 4.62e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02022 - - vun:114188137 1283.86