Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02009 ATGAGGTCAGAGTGCACCCCGTTTTGGAGAGTGAATCATGTTCCGGTGGTTCCACTACAAAGACCTGATGAGATGCATACTCCAAGCCCTTCCTGGATGCAGACTACATCAGGGTATGAGGATATGTACAGTGAATTAGGAATTCCAACGATGATTACTTGGAGTTATGATGGGAAAGAAGTGGCTGTGGAGGGATCATGGGATAATTGGAAAACAAGAATGTCCTTACAGAGATCAGGGAAGGATTTCACAATAATGAAAGTGTTGCCGTCTGGTGTATACCAATTTAGATTTGTTGTGGATGGCCAGTGGAGGTATGCACCTGACTTGCCTTGGGCTCAAGATGATGCGGGTAATGCTTACAACATCTTGGACTTGCAGGATTATGTTCCTGAGGACATCGGAAGCATTTCTAGTTTTGAACCTCCTAAATCCCCAGACTCTAGTTATAACAACCAACAACTTAGTTCCGAAGATTATGCAAAGGAGCCACCATTGGTTCCTCCATATTTGCAAATGACGCTTCTTAATATTCCGTCAACAAATATGGAAATCCAACCTCTTACAGCCAGACCTCAGCATGTAGTGCTCAATCATCTTTACATGCAGAAAGGGAAGGGTAGCCCTTCAGTGGTCGCACTTGGTACAACTCATCGGTTTCTAGCCAAATATGTGACTGTGGTGCTGTACAAGTCTTTGCAGAGGTAA 708 0.4407 MRSECTPFWRVNHVPVVPLQRPDEMHTPSPSWMQTTSGYEDMYSELGIPTMITWSYDGKEVAVEGSWDNWKTRMSLQRSGKDFTIMKVLPSGVYQFRFVVDGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIGSISSFEPPKSPDSSYNNQQLSSEDYAKEPPLVPPYLQMTLLNIPSTNMEIQPLTARPQHVVLNHLYMQKGKGSPSVVALGTTHRFLAKYVTVVLYKSLQR* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02009 235 SUPERFAMILY E set domains 48 133 IPR014756 -
Phac6g02009 235 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 7 235 IPR043554 -
Phac6g02009 235 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 161 231 IPR006828 GO:0005515
Phac6g02009 235 CDD E_set_AMPKbeta_like_N 49 125 - -
Phac6g02009 235 SMART AMPKBI_2 143 233 IPR006828 GO:0005515
Phac6g02009 235 SUPERFAMILY AMPKBI-like 130 232 IPR037256 -
Phac6g02009 235 Pfam Glycogen recognition site of AMP-activated protein kinase 48 127 IPR032640 -
Phac6g02009 235 Gene3D Immunoglobulins 43 130 IPR013783 -
Phac6g02009 235 Gene3D - 136 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02009 Phac-Chr6 20227294 20230936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02009 47 128 Protein tyrosine phosphatase (PTP) family AT3G01510 30.682 1.87e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02009 K07199 - gmx:100777497 454.907