Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02005 ATGGCTGAGTCTGATAACGATTCAGGAGGGCAAGCCGGTAACACGAGTGGAGGCAATGAATTCTCAGGGTGCAGAGAGCAAGACAGGTTCCTTCCCATAGCCAACGTGAGCAGGATCATGAAGAAGGCGTTGCCGGCGAACGCGAAGATCTCGAAGGAGGCGAAGGAAACCGTGCAAGAGTGTGTGTCGGAGTTCATCAGCTTCATAACAGGTGAAGCATCTGATAAGTGCCAGAAGGAGAAGAGAAAAACTATCAACGGTGATGACCTACTGTGGGCCATGACCACACTGGGGTTTGAGGAGTATGTGGAGCCTCTCAAGATTTACCTGCACAAGTATAGGGAGATGGAGGGGGAGAAAACTGCTATGATGGGAAGGCCACTGGGTGGTGCTGGTGCTGGTGGTGGTGATCAGAGGGATGAGGCTTATGGCCATGCTCATGGCCATGGAGGTATTGTACCAAACTCTATGATGGTGATGATGGGGCATCAGGGACACGTGTATGGATCTGGGAGTGCTGGCTCAGCATCTTCTGCAAGAACTAGATAG 549 0.5173 MAESDNDSGGQAGNTSGGNEFSGCREQDRFLPIANVSRIMKKALPANAKISKEAKETVQECVSEFISFITGEASDKCQKEKRKTINGDDLLWAMTTLGFEEYVEPLKIYLHKYREMEGEKTAMMGRPLGGAGAGGGDQRDEAYGHAHGHGGIVPNSMMVMMGHQGHVYGSGSAGSASSARTR* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02005 182 Gene3D Histone, subunit A 19 142 IPR009072 GO:0046982
Phac6g02005 182 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 7 141 IPR027113 GO:0001228|GO:0006355|GO:0016602
Phac6g02005 182 PRINTS CCAAT-binding transcription factor subunit A signature 77 95 - -
Phac6g02005 182 PRINTS CCAAT-binding transcription factor subunit A signature 58 76 - -
Phac6g02005 182 PRINTS CCAAT-binding transcription factor subunit A signature 96 114 - -
Phac6g02005 182 MobiDBLite consensus disorder prediction 1 22 - -
Phac6g02005 182 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 30 94 IPR003958 -
Phac6g02005 182 FunFam Nuclear transcription factor Y subunit B-3 19 142 - -
Phac6g02005 182 ProSitePatterns NF-YB/HAP3 subunit signature. 61 77 IPR003956 GO:0005634|GO:0006355|GO:0043565
Phac6g02005 182 SUPERFAMILY Histone-fold 27 126 IPR009072 GO:0046982
Phac6g02005 182 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02005 Phac-Chr6 20215075 20216389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02005 1 126 CCAAT-HAP3 Transcription Factor Family AT4G14540 83.333 1.00e-72 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Phac6g02005 CBFD_NFYB_HMF 1.4e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02005 K08065 - gmx:100778034 256.529