Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02002 ATGTTGCATTGCAGCGTTGTCCACTTGATGCTATACGCTCTGTGTTGTGTCTTTATGAGAGAGAAAGAGACTGAGCCCACAACTTGCTCGGCTTTGGATGCGGAGGAGGAAGATGAGGATGATGACAATTCATCAGCAAGTACTGAAGGAAATGGCCCTAGAAAGAGGAGGAGAAAGACGGTGAGAAAGCTTGAAGGTTTTGTGAAGGATTTGGTGACAAAGGTGATGGAGAAGCAAGAGCAGATGCACAAACAGTTGGTGGAAATCATAGAAAACAAGGAAAGGGAAAGGATTAAGAGAGAAGAAGCTTGGAAGAATGAGGAGATGGAGAGAATTAGAAAAGAGGAAGAGGCTAGAGCCCAAGAAAAGTCTCGAAATTTGGCCCTCATATCCTTCATTCAGAATCTGTTGGGCCACGAAATTCAAATCCCCCAACCAGTAGAAGCATGCAACAAAAGAGAAGAGAATGAAGTTGAGGTGAATGCTCAAAAGGAATTTAATGGTGATCCCAGTAAGAGTAGATGGCCTGATGTTGAAGTACAATCACTTATCACAGTGAGAACTTCATTGGAGCACAAGTTCCGTTTCATGGGATCGAAAGGGTCAATATGGGAAGAGATATCTGAAGCAATGCATGGCTTGGGCTATAATCGGTCTGCAAAGAAGTGTAAGGAGAAGTGGGAAAACATCAACAAGTACTATAAAAGGACAATAGGGAGTGGCAAGAAAAGGCGTCAAAATAGTAAAAGTTGCCCTTATTTTGATGAGTTGGACATTCTGTATAGAAACGGCCTCCTAAGTATTGGAAATGCCTTGAGCAATACCACCGATGCTCCCCAGATTGAAGAAAAGGAGTAG 858 0.4289 MLHCSVVHLMLYALCCVFMREKETEPTTCSALDAEEEDEDDDNSSASTEGNGPRKRRRKTVRKLEGFVKDLVTKVMEKQEQMHKQLVEIIENKERERIKREEAWKNEEMERIRKEEEARAQEKSRNLALISFIQNLLGHEIQIPQPVEACNKREENEVEVNAQKEFNGDPSKSRWPDVEVQSLITVRTSLEHKFRFMGSKGSIWEEISEAMHGLGYNRSAKKCKEKWENINKYYKRTIGSGKKRRQNSKSCPYFDELDILYRNGLLSIGNALSNTTDAPQIEEKE* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02002 285 Pfam Myb/SANT-like DNA-binding domain 173 258 IPR044822 -
Phac6g02002 285 Coils Coil 76 126 - -
Phac6g02002 285 ProSiteProfiles Myb-like domain profile. 167 231 IPR001005 -
Phac6g02002 285 PANTHER FI21293P1 34 271 - -
Phac6g02002 285 MobiDBLite consensus disorder prediction 33 58 - -
Phac6g02002 285 Gene3D - 175 236 - -
Phac6g02002 285 FunFam Trihelix transcription factor GT-2 175 236 - -
Phac6g02002 285 CDD GT1 173 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02002 Phac-Chr6 20202809 20205193 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02002 55 263 Trihelix Transcription Factor Family AT5G47660 45.536 6.58e-54 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phac6g02002 Myb_DNA-bind_4 6.9e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02002 - - gmx:100820302 420.624