Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01986 ATGATTCTGAAATTGGTGATCCATTTCATCATTTTGGTAATATGGGAGGTATCTGCACAAGGTGGGTTACCTGTAGCAAAGCCTGGCTGTGATTGGCGATGTGGAGATGTTCCAATTCCCTTTCCGTTTGGAATGAAGAGTTCGGAGTGCTATGCAGGAAAATGGTTTGAAATAGAATGCAGAAACACTTCCACATATACCCATTACACACCTTATCTCAAGTCACTAGGACTGGAAGTGACATCCATTTATCTCGAAGCAGGCACAGTTACTATCAAGCATCCTATTTACCGTAGTAACTGCGGATCCAAAGATTCTCCGCCGGTCAACCAGTCGCTGGAAGGAAGCCCTTTCGTATATTCCCAGCAATACAACAAATTTGTGGCTGCAGGTTCTAATATTATTGCTATTTTGCAGTTAAATGGGTCAGAAGTTAGTGGTTGTGTGTCCATCTGCGAAGAGGACTACAAGGTGGGTGACATCGGGAAAATGGATCTTAGAAAGAGTGATTGTACTGGGAAGTCTTGCTGTGACAGTTCCCTGCCACTGTATCTTACAGAATACAGCACTGAAGTAAAAGGTTTAAAGGAGAATGAAACGAGTGATGAGTGCAGTTACGCCATGGTTGTACAGCAAAATCTGAACTACCGGCGATCCAATTCTTATAATGCTCCCAAAAGCTACTACTTTCCTGTGGATGGTCTAGTGAAGGATTTAGATGTGGTCCCTGCGGTGCTTGAATGGGAGATTCTGAACAATTTGAACCTTACACTTCCTTCGGATTCTCTCTCCTACTGTTATGATACTAATGTTACATCTTCACGATATAAGCGATCAGGTCAGAGATGTTCCTGCAATACAGGCAAAATAGTAAATCGAGAAGTTCCGTACGGTTACGGTAATCCCTACGTTGAGCGAGGTTGCCCAGATCCTCATCTACGTCCAGGTCCAGACATCAAACCGAGAATATCCATCATAAAAGGAGTTTCTATAATCTTCTTCGGATCCATCATTTTACTCCTTATCTTATGGCGAGTGTTGAAGGCTACAAAAAAAGCTATTGTGGAAAAACATAGAAAAAGAATGTTCAAAAGAAATGGAGGATTATTATTACAACAAAGATTCTCTTCTGGTGAAGTTAATGTGGATAAAGTTAAACTTTTCAGCTTAAAAGAGTTGAAGAAGGCCACTGATAACTTCAACACAAATAGAGTACTTGGAAAAGGAGGTCAAGCTACTGTTTACAAAGGCATGTTGATTAATGGAACAATTATTGCAGTGAAAAAATTTAAGGTCCAAGGAAAAATAGAAGAATTCATCAATGAGTTTGTCATTCTGTCACAAATTAACCACAGAAACGTGGTCAAGTTGTTAGGAAGTTGTTTGGAGACTGAAATTCCTTTACTTGTTTATGAATTCATTCCTAATGGTAATCTTTTTGAGTACTTGCATCAACAAAATGAGGATTTGCCAATGACATGGGACATTCGTTTGAGAATTGCCACTGAAATTGCTGGAGCTTTGTTTTACTTACACTCTGGTGCTTCTCAGCCTATTTATCATAAAGATATCAAGTCAACAAATATACTTTTGGATGAAAAGTATAGAGCAAAAGTAGCAGATTTTGGTACATCTAGAATGATTTCCATTGATGTTACTCATCTTACTACAGTAGTTCAAGGAACATTTGGTTACTTGGATCCTGAATATTTTCAAACTAGTCAATTCACAGAAAAAAGTGACGTATACAGCTTTGGAGTAGTTCTTGTTGAACTCTTAACAGGGAAAAAGCCAATAAACCTCCTAAGTTCAGAAGAAGCCAAAAGTTTAGCTTCATATTTCATCATGTGTGTGGAGCAACATTGTGTATTTGATATTATTGACGAAAGAGTGATGAAAGAAGGAGAGAAAAATCATATCATGAAAGTTGTCAATCTTGCAAATAGATGTTTAAAGTTGAATGGAAAGAGACGACCAACAATGAAGGAAGTCACGTTAGAATTAGAAGGTATTCGAAAATTGGAAGGAAAATCAAATACACAAGAAAGACATAAAGAACTTGTTAGAAGTGAAGACTATCAATCTTGGAATGATTATTCTATCTCAGAAATAAGGTCAGCTTTTGATCTAAGTGACAGAACACAAATCTTGGAAGATATTCATATTCTTACCATATAA 2178 0.3774 MILKLVIHFIILVIWEVSAQGGLPVAKPGCDWRCGDVPIPFPFGMKSSECYAGKWFEIECRNTSTYTHYTPYLKSLGLEVTSIYLEAGTVTIKHPIYRSNCGSKDSPPVNQSLEGSPFVYSQQYNKFVAAGSNIIAILQLNGSEVSGCVSICEEDYKVGDIGKMDLRKSDCTGKSCCDSSLPLYLTEYSTEVKGLKENETSDECSYAMVVQQNLNYRRSNSYNAPKSYYFPVDGLVKDLDVVPAVLEWEILNNLNLTLPSDSLSYCYDTNVTSSRYKRSGQRCSCNTGKIVNREVPYGYGNPYVERGCPDPHLRPGPDIKPRISIIKGVSIIFFGSIILLLILWRVLKATKKAIVEKHRKRMFKRNGGLLLQQRFSSGEVNVDKVKLFSLKELKKATDNFNTNRVLGKGGQATVYKGMLINGTIIAVKKFKVQGKIEEFINEFVILSQINHRNVVKLLGSCLETEIPLLVYEFIPNGNLFEYLHQQNEDLPMTWDIRLRIATEIAGALFYLHSGASQPIYHKDIKSTNILLDEKYRAKVADFGTSRMISIDVTHLTTVVQGTFGYLDPEYFQTSQFTEKSDVYSFGVVLVELLTGKKPINLLSSEEAKSLASYFIMCVEQHCVFDIIDERVMKEGEKNHIMKVVNLANRCLKLNGKRRPTMKEVTLELEGIRKLEGKSNTQERHKELVRSEDYQSWNDYSISEIRSAFDLSDRTQILEDIHILTI* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01986 725 Pfam Wall-associated receptor kinase galacturonan-binding 30 93 IPR025287 GO:0030247
Phac6g01986 725 FunFam Wall-associated receptor kinase 2 370 473 - -
Phac6g01986 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 519 531 IPR008271 GO:0004672|GO:0006468
Phac6g01986 725 Gene3D Phosphorylase Kinase; domain 1 372 473 - -
Phac6g01986 725 Gene3D Transferase(Phosphotransferase) domain 1 474 697 - -
Phac6g01986 725 SMART serkin_6 400 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01986 725 SUPERFAMILY Protein kinase-like (PK-like) 381 668 IPR011009 -
Phac6g01986 725 ProSiteProfiles Protein kinase domain profile. 400 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01986 725 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 25 679 IPR045274 GO:0007166
Phac6g01986 725 Pfam Protein kinase domain 401 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01986 725 FunFam Wall-associated receptor kinase 2 474 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01986 Phac-Chr6 20076122 20082396 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01986 3 672 Receptor kinase-like Gene Family AT1G16130 41.994 8.73e-170 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Phac6g01986 Pkinase 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01986 - - gmx:100775935 897.886