Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01984 ATGATTCTGAAATTGATGATCCATTTCATCATTTTGGTACCATGGGAGGTATCTGCACAAGGTGAGTTACCAGTAGCAAAGTCTGGCTGTGATTCGAGATGTGGAGATGTTACAATTCCCTTTCCGTTTGGAATGAAGAGTTTGGAGTGCTATGCAGGGAAATGGTTTGAAATAGAATGCAGAAACACTTCCACATATACCCATTACACACCTTACCTCAAGTTAATAGGACTGGAAGTAATAGACATTTATGTCGAAGCAGGCATAGTTACTATCAATCATCCTATTTACCGTAGTAACTGCGGATCCAAAGATTCTCCACCAGTCAACCAGTCGTTGGAAGGAAGCCCTTTCGTGTATTCTCAAGAACACAACAAATTTGTGGCCGCAGGTTGTAACAGTGTTGCTACTTTGAAGTTAAATGGATCAGAAGTTAGTGGTTGTGTGTCCATCTGCGACGAGAACTACAAGGTGGGTGATATCGGAAATATCAAGCTTATTGAAAGTGATTGTAATGGGACGTCTTGCTGTGAAAGTTCCCTGCCACCGTATCTTAAAGAATACAGCATTGAAATAAAAGGTTTAAAGGAGAATGAAAGTAGTCATGAGTGCAGTTACGCCATGGTTGTACAGCAAAATCGGGACTACGGCTACCGACACTATTCTTATAATGATCCCAAAAGCTACTTTGTTGAGGATGGTGAGATGAAGGATTTAGATGTAGTCCCTGCGTTGCTTGAATGGGAGATTGTGAACAATTTGAACCTTACACTCCCTTCAGATCATCACTCTGAGTGTTATGATACTAAGATTACATTTTCACGATATAAACGTTCAGGTCAAAGATGTTCCTGCAACATCGGTTTTGGTAATCCCTACGTTGAGGGAGGTTGTCCAGCAGATGATCATCCTCCTCCGCAATACAGGAAATCGATCAGTCCTGTAACAATATCCATTATAAAAGGAGTTTCTATAAGCTTCGGATCCATCATTTTACTCCTTATTTTATGGCGAGTGTTGAAGGATACCAAAAAAACTATAGTGGAAAAATACAGAAAAAAAATCTTCAAAAGAAATGGAGGATTATTGTTAAAACAAAGATTGTCTTCTGGTGAAGTTAATGAGGATAAAGTTAAACTTTTCAGCTTAAAGGAGTTGGAGAAGGCCACCGATAACTTCAACACGAATAGAGTAATTGGAAAAGGAGGTCAAGCTACTGTTTACAAAGGCATGTTGATTAATGGAATAATTATTGCAGTGAAAAAATTTAAGGTCCAAGGAAAAATAGAAGAATTCATCAATGAATTTGTCATTCTGTCACAAATTAACCACAGAAACGTGGTAAAGTTGTTAGGAAGTTGTTTGGAGACTAAAATTCCTTTGCTTGTTTATGAATTCATTCCTAATGGTAACCTTTTTGAGTACTTGCATCAACAAAATGAGGATTTGCCAATGACATGGGACATTCGTTTGAGAATTGCCACTGAAGTTGCTGGAGCTTTGTTTTACTTGCACTCTGGTGCTTCTCAGCCTATTTATCATAAAGATATCAAGTCAACAAATATACTTTTGGATGAAAAGTATAGAGCAAAAGTAGCAGACTTTGGTACATCTAGAATGATTTCCTGCGATGTTACTCACCTTACTACAAAAGATTGTGTATTTGATATTATTGATGAAAGGGTGATTAAGGAAGGGGAGAAAAATCATATCATGGAAGTTGTCAATCTTGCAAATAGATGTTTAGAGCTGAATGGAAAGAGACGACCAACTATGAAAGAAGTCACATTAGAATTAGAAAGTATTCGAAAATTGGAAGCAAAGTCAAATGCACAAGAAAGACATAATGAACTTGTTAGAAGTGAAGACTATCAATCTTGGGATGATTACTCTACTATCTTAAAAATAAGGTCAGCTTTTGATCTAAGTAACAGAACACCAAACTTGGAAGATATTCATATTCGTACCATATAA 1974 0.3713 MILKLMIHFIILVPWEVSAQGELPVAKSGCDSRCGDVTIPFPFGMKSLECYAGKWFEIECRNTSTYTHYTPYLKLIGLEVIDIYVEAGIVTINHPIYRSNCGSKDSPPVNQSLEGSPFVYSQEHNKFVAAGCNSVATLKLNGSEVSGCVSICDENYKVGDIGNIKLIESDCNGTSCCESSLPPYLKEYSIEIKGLKENESSHECSYAMVVQQNRDYGYRHYSYNDPKSYFVEDGEMKDLDVVPALLEWEIVNNLNLTLPSDHHSECYDTKITFSRYKRSGQRCSCNIGFGNPYVEGGCPADDHPPPQYRKSISPVTISIIKGVSISFGSIILLLILWRVLKDTKKTIVEKYRKKIFKRNGGLLLKQRLSSGEVNEDKVKLFSLKELEKATDNFNTNRVIGKGGQATVYKGMLINGIIIAVKKFKVQGKIEEFINEFVILSQINHRNVVKLLGSCLETKIPLLVYEFIPNGNLFEYLHQQNEDLPMTWDIRLRIATEVAGALFYLHSGASQPIYHKDIKSTNILLDEKYRAKVADFGTSRMISCDVTHLTTKDCVFDIIDERVIKEGEKNHIMEVVNLANRCLELNGKRRPTMKEVTLELESIRKLEAKSNAQERHNELVRSEDYQSWDDYSTILKIRSAFDLSNRTPNLEDIHIRTI* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01984 657 SMART serkin_6 393 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01984 657 Pfam Protein tyrosine and serine/threonine kinase 395 550 IPR001245 GO:0004672|GO:0006468
Phac6g01984 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 512 524 IPR008271 GO:0004672|GO:0006468
Phac6g01984 657 Pfam Wall-associated receptor kinase galacturonan-binding 30 92 IPR025287 GO:0030247
Phac6g01984 657 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 552 610 IPR045274 GO:0007166
Phac6g01984 657 ProSiteProfiles Protein kinase domain profile. 393 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01984 657 Gene3D Transferase(Phosphotransferase) domain 1 470 548 - -
Phac6g01984 657 Gene3D Transferase(Phosphotransferase) domain 1 549 628 - -
Phac6g01984 657 SUPERFAMILY Protein kinase-like (PK-like) 375 599 IPR011009 -
Phac6g01984 657 FunFam Protein kinase superfamily protein 424 470 - -
Phac6g01984 657 Gene3D Phosphorylase Kinase; domain 1 365 466 - -
Phac6g01984 657 Coils Coil 602 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01984 Phac-Chr6 20063051 20067043 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01984 30 603 Receptor kinase-like Gene Family AT1G16130 35.983 1.77e-123 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Phac6g01984 PK_Tyr_Ser-Thr 3.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01984 - - gmx:100775935 666.766