Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01979 ATGTCTGAAACCTTAACTCAGACCTTGCACCCTTCAGATGAAGCTGTGTCCCTGGAGGTGGAGGACAACTACTGTGGAAGAAGCAGCAGCGTGAGTGAGATAGAGGAAGATAACTCCTCAGACTTCCCCTTCAATAATCATGTTCCTAAACCTATGGTTACCATTAGTGAAGACGAGAAGGAGGAGGAAGACACTGTCTATGTGGCGGTGGGAAAGAGCCAGAGTAGCATCGAAGCCTTGTCATGGACCCTAAACAACTTGACCACTCCATCTACCATGCTCTATCTCATACACGTTTTCCCAGAGATCCACCTCCTTCCAAATCCCTTGGGAGTGGGAATGATTCCAAAGAACCAAGTGAGTCCTGAGCAGGTAGAGAGCTACATGGCCCAAGAAAGAGGCAAGAGAAGAGAGCTCCTCAACAAATTCCTCCAATTATGTTCTGCTTCCAAGGTACTAATTTTACAAATGGAAGTATTTTCCAAATTGCACCCAAAATCAAAGATTTGA 510 0.4549 MSETLTQTLHPSDEAVSLEVEDNYCGRSSSVSEIEEDNSSDFPFNNHVPKPMVTISEDEKEEEDTVYVAVGKSQSSIEALSWTLNNLTTPSTMLYLIHVFPEIHLLPNPLGVGMIPKNQVSPEQVESYMAQERGKRRELLNKFLQLCSASKVLILQMEVFSKLHPKSKI* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01979 169 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 65 152 - -
Phac6g01979 169 Gene3D HUPs 52 169 IPR014729 -
Phac6g01979 169 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 23 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01979 Phac-Chr6 20026339 20028306 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01979 69 158 Plant U-box Gene Family AT5G57035 31.111 2.96e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01979 - - gmx:100781056 231.491