Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01977 ATGTCTGAAACCTTAACTCAGACCTTGCACCCTTCAGATGAAGCTGTGTCCCTGGAGGTGGAGGACAACTACTGTGGAAGAAGCAGCAGCGTGAGTGAGATAGAGGAAGATAACTCCTCAGACTTCCCCTTCAATAATCATGTTCCTAAACCTATGGTTACCATTAGTGAAGACGAGAAGGAGGAGGAAGACACTGTCTATGTGGCGGTGGGAAAGAGCCAGAGTAGCATCGAAGCCTTGTCATGGACCCTAAACAACTTGACCACTCCATCTACCATGCTCTATCTCATACACGTTTTCCCAGAGATCCACCTCCTTCCAAATCCCTTGGGAGTGGGAATGATTCCAAAGAACCAAGTGAGTCCTGAGCAGGTAGAGAGCTACATGGCCCAAGAAAGAGGCAAGAGAAGAGAGCTCCTCAACAAATTCCTCCAATTATGTTCTGCTTCCAAGGTTAAGGTGGACACCATCTTGATTGAGAGTGACTTGATTGCAAAGGCTATCATCGACCTGATTCCTATTCTTCAAATAAGAAAACTAGTGATTGGAGCCAGCAAATCCCAAATAAGAAAAATGAGATCAAGGAAAGGGAGTGGCATAGCTGATCAGATACTGCAGAATGCTCCAGAAGGTTGCGATGTGAGTATTGTATGTGAAGGAAAGGATGTGAATGAACAGATAGCTGGTGCCATTGCCACTGATACTTCCATGTCCCAGAAAAACAAGCATCAGCAAAATGCTTCGGTTTCATGTGTTTGTTTCAACTTTTAA 771 0.4475 MSETLTQTLHPSDEAVSLEVEDNYCGRSSSVSEIEEDNSSDFPFNNHVPKPMVTISEDEKEEEDTVYVAVGKSQSSIEALSWTLNNLTTPSTMLYLIHVFPEIHLLPNPLGVGMIPKNQVSPEQVESYMAQERGKRRELLNKFLQLCSASKVKVDTILIESDLIAKAIIDLIPILQIRKLVIGASKSQIRKMRSRKGSGIADQILQNAPEGCDVSIVCEGKDVNEQIAGAIATDTSMSQKNKHQQNASVSCVCFNF* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01977 256 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 23 255 - -
Phac6g01977 256 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 65 217 - -
Phac6g01977 256 Gene3D HUPs 46 230 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01977 Phac-Chr6 20026339 20028306 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01977 69 221 Plant U-box Gene Family AT5G57035 30.065 1.82e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01977 - - gmx:100781056 395.971