LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac6g01901	ATGGGTGAAACAGTTTCACTATTCCTACTACTATTTTTCTCTCATTTGTTGATTGGACAAGCAAATACAGCAAATCAGGATTACACTGCTCTGCTGACTCTAATGGCTGCATGGGAGAACACTCCACCTAACTGGGTGGGTTCAGATCCTTGCGGTGGCTGGGATGGCATCGAGTGTACAAATTCACGCATTACCTCCATATCATTAGCAAGCATGGATTTGTCTGGTCAGCTTACTTCAGATATTGGATTACTCTCTGAACTCCTGATCTTGGATCTGTCTTACAATAAGAATTTAACTGGACCACTTCCCAGTAACATTGGAAACTTGAGAAAGCTGAGAAACTTACTTCTTATTAGTTGTGGTTTCACTGGTCCTATCCCAGCTACAATTGGAAATCTGGAACGGCTAGTCTTTCTATCTTTAAATTCCAATGGATTCACAGGGCCAATTCCAGCTGCCATTGGTAATCTCTCAAATTTGTATTGGCTAGACTTAGCTGAAAACCAGCTTGAGGGCCCCATCCCCATATCCAATGGAACTACTCCTGGTCTTGATATGATGCACCATACAAAACACTTTCATTTTGGGAGGAATAAGCTTTCAGGAGACATACCGGCTCAACTTTTTAGCTCAGAAATGTCTCTCATTCATGTGCTTTTTGAAACCAACCGATTTACTGGAAGCATTCCATCTACACTTGGCCTTGTCAAGTCTCTGGAGGTGGTTCGCTTTGATGACAACTTTTTAAGTGGATCTTTGCCCCAGAACATCACCAATCTTACAAGTGTTAGGGAACTGTTCCTGTCCAAAAATCGCCTGTCTGGTTCCCTTCCAAACCTTACCGGAATGAATTCCCTCAGTTACCTAGATGTGAGCAATAACAGTTTTGATCCATCAAACTTTCCATCGTGGTTGTCAACTCTCTCAGCTTTGACGACAATAATGATGGAAGATACAAAACTTGAAGGAGCTATTCCTGTTTCTTTGTTCAACCTACAGCAACTGCAGACAGTGGTGCTGAAAAACAACAAGCTAAATGGCACTTTAGATACTGGCACATTCATCAGCAACCAACTGGACCTCCTCGATTTGCAGCTTAATTATATTGAAAAGTTTGAAGCACAAACCGATGTATCTAAAGTGAAGATAATACTTTTGAATAATCCAATTTGCCAAGAGACAGGAGTTCCACAGAGTTATTGTTCCATAACAACATCTAATGACTCATATTCAACGCCACCAGAAAACTGTGTACCTGTTCCCTGCAGCTTAGATCAGACATTAAGCCCCAAATGCAAATGTGCATACCCATATACAGGAACTTTATTTCTCAGAGCTCCTTCCTTCTCAGACTTGGGAAACCAGACTGTCTTTGTAACCCTGCAGTTAACTCTAATGCAGTCTTTTCAAGTTCATAATAAACCTGTGGATTCAGTTTCTTTAAGCAATCCAAGGAAAAACATATATCAGTACCTTGAATTGACTTTAAAATTATTTCCATCTGGCCAAGATCGTTTCAATCGAACTGGGATTTCCAGTATAGCCTTTCTTCTCAGCAACCAAACATACAAGCCTCCTTCAATGTTTGGACCATATTATTTTATTGCTGATGACTATGAAAACTATATGAATGACACAGTATTAGAAGGTCCTGTGACAACATCCAGTAAATCTTCAAATACTGGCATCATTGCTGGAGCTGCGGCTGGGGGTGCTGCCCTGTTGGTTTTGGTACTTGTTCTATTTGTGTATGCTCTCCAACGGAAGAATAAGTCAGTAAGAGCAACTGAAAAAAACAATCCTTTTGAACAATGGGATCCAGATGAGAGTAATAGTAGCATCCCACAGTTGAAAGGAGCAAGGCGCTTCAATTTTGAAGAGATACAAATCTGCACCAAAAACTTCTCACAAGTCAATAATATAGGATCTGGCGGTTATGGGAAGGTTTATCGGGGAACACTTCCCAACGGGCAACTAATTGCAGTCAAGCGAGCTCAGAAGGAATCTATGCAGGGAGGGTTGGAGTTTAAAACCGAGATTGAACTTCTATCAAGGGTCCACCATAAAAATCTTGTTAGCCTTATCGGTTTCTGCTTTGATCAAGGAGAACAAATGCTGATTTATGAGTACGTTGCAAATGGTACTTTGAAGGACACTCTTTCAGGGAAATCTGGAATTAGATTAGACTGGATTAGAAGGCTGAAAATAGCCCTTGGTGCTGCCAGGGGTCTGGACTATCTGCATGAACTTGCCAATCCTCCAATCATACACAGAGACATCAAATCCACTAATATCTTACTGGATGAACGCTTGAATGCTAAAGTATCTGATTTTGGTCTCTCCAAACCTTTAGGTGATGGTGCAAAAGGTTATATCACCACACAAGTCAAAGGAACAATGGGCTACTTGGACCCAGAGTATTATATGACTCAACAGTTGACTGAGAAAAGTGATGTTTACAGCTTTGGAGTGCTAATGTTAGAGCTGATAACTGCAAGAAGGCCAATAGAGCGAGGGAAGTATATTGTGAAAGTGGTCAAGGAAGCTATAGACAAGACAAAAGGCTTCTGTGGTCTTGAGGAACTTCTCGATCCAACTATTGATTTCGGAACAGCACTGAATGGTTTTGAGAAGTTTGTGGATCTCTCCTTGCAGTGTGTTCAAGAGTCAAGTTCTGACAGGCCTACAATGAATTATGTGGTGAAAGAAATTGAGAACATGTTGCAGTTGGCTGGTTCAAGCCCCATTTTATCAGCATCAGCTTCCACTTCATCTAGTTATAACAATCCAATGAAGAGTTCTCTCCATCCTTACGAGAATGAATACTTTGATTCAAGTGTCGTCCTTCCACGTCCGTAG	2862	0.4109	MGETVSLFLLLFFSHLLIGQANTANQDYTALLTLMAAWENTPPNWVGSDPCGGWDGIECTNSRITSISLASMDLSGQLTSDIGLLSELLILDLSYNKNLTGPLPSNIGNLRKLRNLLLISCGFTGPIPATIGNLERLVFLSLNSNGFTGPIPAAIGNLSNLYWLDLAENQLEGPIPISNGTTPGLDMMHHTKHFHFGRNKLSGDIPAQLFSSEMSLIHVLFETNRFTGSIPSTLGLVKSLEVVRFDDNFLSGSLPQNITNLTSVRELFLSKNRLSGSLPNLTGMNSLSYLDVSNNSFDPSNFPSWLSTLSALTTIMMEDTKLEGAIPVSLFNLQQLQTVVLKNNKLNGTLDTGTFISNQLDLLDLQLNYIEKFEAQTDVSKVKIILLNNPICQETGVPQSYCSITTSNDSYSTPPENCVPVPCSLDQTLSPKCKCAYPYTGTLFLRAPSFSDLGNQTVFVTLQLTLMQSFQVHNKPVDSVSLSNPRKNIYQYLELTLKLFPSGQDRFNRTGISSIAFLLSNQTYKPPSMFGPYYFIADDYENYMNDTVLEGPVTTSSKSSNTGIIAGAAAGGAALLVLVLVLFVYALQRKNKSVRATEKNNPFEQWDPDESNSSIPQLKGARRFNFEEIQICTKNFSQVNNIGSGGYGKVYRGTLPNGQLIAVKRAQKESMQGGLEFKTEIELLSRVHHKNLVSLIGFCFDQGEQMLIYEYVANGTLKDTLSGKSGIRLDWIRRLKIALGAARGLDYLHELANPPIIHRDIKSTNILLDERLNAKVSDFGLSKPLGDGAKGYITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELITARRPIERGKYIVKVVKEAIDKTKGFCGLEELLDPTIDFGTALNGFEKFVDLSLQCVQESSSDRPTMNYVVKEIENMLQLAGSSPILSASASTSSSYNNPMKSSLHPYENEYFDSSVVLPRP*	954

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac6g01901	953	FunFam	Leucine-rich repeat protein kinase family protein	601	711	-	-
	Phac6g01901	953	SMART	serkin_6	636	911	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac6g01901	953	Gene3D	Ribonuclease Inhibitor	23	183	IPR032675	-
	Phac6g01901	953	SUPERFAMILY	Protein kinase-like (PK-like)	622	934	IPR011009	-
	Phac6g01901	953	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	756	768	IPR008271	GO:0004672\|GO:0006468
	Phac6g01901	953	Gene3D	Ribonuclease Inhibitor	184	389	IPR032675	-
	Phac6g01901	953	CDD	STKc_IRAK	642	908	-	-
	Phac6g01901	953	Gene3D	Phosphorylase Kinase; domain 1	607	711	-	-
	Phac6g01901	953	FunFam	LRR receptor-like serine/threonine-protein kinase HSL2	712	921	-	-
	Phac6g01901	953	FunFam	Leucine-rich repeat protein kinase family protein	181	280	-	-
	Phac6g01901	953	Gene3D	Transferase(Phosphotransferase) domain 1	712	917	-	-
	Phac6g01901	953	ProSiteProfiles	Protein kinase domain profile.	636	909	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac6g01901	953	ProSitePatterns	Protein kinases ATP-binding region signature.	642	664	IPR017441	GO:0005524
	Phac6g01901	953	FunFam	Leucine-rich repeat family protein	26	180	-	-
	Phac6g01901	953	SUPERFAMILY	L domain-like	58	391	-	-
	Phac6g01901	953	PANTHER	RECEPTOR-LIKE PROTEIN 55	37	908	-	-
	Phac6g01901	953	Pfam	Leucine rich repeat N-terminal domain	24	59	IPR013210	-
	Phac6g01901	953	Pfam	Protein kinase domain	637	903	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac6g01901	Phac-Chr6	19634305	19642962	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac6g01901	5	951	Receptor kinase-like Gene Family	AT5G49760	56.993	0.0	1021

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VIII-1	Phac6g01901		Pkinase	1.1e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac6g01901	-		-	gmx:100782366	1575.45