Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac6g01850 | ATGGAGGATTCCGAGGGAGTCCTCAGCTTCGATTTCGAGGGTGGCCTCGACACCGCTCCCTCCGCCGCCGCCGCTCCCTCCGGCCCCCTCGTCCAGCACGACTCCTCCGCTGCCGCTTCCGCCGTGTCCAACGGAGGTCCTCCAGCCCCAGCCCCCTCCGGAACCGAACCCGCGGCCGTCAACGTCCCCGGGCGGCGGAGCTTCCGTCAGACGGTATGCCGGCACTGGTTGCGCAGCCTGTGCATGAAGGGCGACGCGTGCGGGTTTCTGCACCAGTACGACAAGGCGAGGATGCCTGTTTGCCGATTCTTCAGGCTCTATGGAGAGTGTCGAGAACAGGATTGCGTGTATAAACACACGAATGAAGACATCAAGGAGTGTAACATGTACAAGTTGGGATTTTGTCCCAATGGGCCTGATTGCCGATATAGACATGCGAAATCTCCTGGTCCTCCACCTCCTGTTGAAGAGGTCCTTCAGAAGATCCAACATTTATATTCCTACAATTATAACTCATCAAACAAATTTTTCCAACAAAGGGGTTCTAGCTATACCCAACAAGCTGAAAAATCCCAGCTTCCTCAAGGAACTAATTCTACAAATCAAGGGGTGACTGGAAAACCATTACCAGCAGAGTCGGGAAATGCCCAGCCACAACAACAAGTTCAACAGTCTCAACAGCAGGTCAGCCAGAGCCAAATACAAAATGTTGCTAATGGCCAGCCTAATCAAGCCAGTAGAGCTGCTACCCCTTTACCTCAAGGAATATCTAGGTATTTTATTGTTAAAAGTTGCAATCGTGAAAATTTGGAGTTATCTGTACAACAAGGAGTATGGGCAACTCAAAGGAGCAATGAATCCAAACTGAATGAAGCATTTGACTCTGTGGAAAATGTGATATTGATTTTCTCAGTCAACCGTACTAGACATTTCCAGGGTTGTGCAAAGATGACATCCAGAATTGGCGGCTCTGTTGCTGGGGGTAACTGGAAATATGCTCATGGAACTGCACATTATGGGCGAAACTTCTCGGTTAAATGGTTGAAGTTATGTGAACTGTCTTTCCACAAAACTCGCCATTTAAGGAATCCATACAATGAGAACTTACCAGTGAAGATAAGTAGAGATTGTCAGGAGCTGGAGCCCTCAATTGGAGAGCAACTGGCATCGTTGCTTTATCTTGAGCCGGATGGTGAACTTATGGCCGTTTCAGTTGCAGCCGAGTCTAAACGGGAAGAGGAGAAAGCAAAGGGAGTGAATCCAGATAATGGAGGAGAAAATCCAGATATTGTTCCATTTGAAGACAATGAAGAAGAGGAAGAGGAAGAAAGTGATGAAGAGGATGAGAGCTTTGGTCATGGTGTAGGGCCAGCTGGTCAAGGCAGGGGTAGGGGCAGAGGTATGATGTGGCCACCTCATATGCCTCTTCCACGTGGAGCCCGACCCATGCCTGGAATGCAGGGCTTTAACCCTGTAATGATGGGTGATGGGTTATCCTATGGGCCCGTTGCACCTGACGGTTTTGGCATGCCAGATCTTTTTAGTGTGGGACCCCGTGCTTTTGCACCATACGGTCCCAGATTCTCTGGTGATTTTGGAGGTCCCCCAGCAGCCATGATGTTTCGTGGGCGACCTTCTCAGCCTGGGATGTTTCCAGGTGGTGGCTTTGGGATGATGATGAATCCTGGACGTGGTCCCTTCATGGGGGGGATGGGGGTTGCAGGGGCAAATCCACCAAGAGGTGGTAGGCCGGTTAATATGCCTCCAATGTTTCCACCACCTCCACCCCTACCTCAGAACACAAACCGTCTTGCCAAAAGAGATCAAAGAACTACTGATAGAAATGATAGGTATGGTTCCGGATCAGAGCAGGGTAAGAGTCAAGACATGCTCAGCCAAAGTGGTGCACCTGATGATGATATGCAGTATCAGCAAGGATACAAAGCGAACCAGGATGATCATCCTGCTGTGAACAACTTCCGGAATGATGACAGTGAAAGTGAGGATGAAGCACCTAGGAGGTCAAGACATGGAGAGGGGAAAAAGAAAAGGCGAGGCCCAGAAGATGTTAATACAAACTATAATCATTAG | 2091 | 0.4959 | MEDSEGVLSFDFEGGLDTAPSAAAAPSGPLVQHDSSAAASAVSNGGPPAPAPSGTEPAAVNVPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLYSYNYNSSNKFFQQRGSSYTQQAEKSQLPQGTNSTNQGVTGKPLPAESGNAQPQQQVQQSQQQVSQSQIQNVANGQPNQASRAATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVENVILIFSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESDEEDESFGHGVGPAGQGRGRGRGMMWPPHMPLPRGARPMPGMQGFNPVMMGDGLSYGPVAPDGFGMPDLFSVGPRAFAPYGPRFSGDFGGPPAAMMFRGRPSQPGMFPGGGFGMMMNPGRGPFMGGMGVAGANPPRGGRPVNMPPMFPPPPPLPQNTNRLAKRDQRTTDRNDRYGSGSEQGKSQDMLSQSGAPDDDMQYQQGYKANQDDHPAVNNFRNDDSESEDEAPRRSRHGEGKKKRRGPEDVNTNYNH* | 697 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac6g01850 | 696 | Pfam | YT521-B-like domain | 336 | 391 | IPR007275 | GO:0003723 | |
Phac6g01850 | 696 | Pfam | YT521-B-like domain | 257 | 319 | IPR007275 | GO:0003723 | |
Phac6g01850 | 696 | PANTHER | YTH YT521-B HOMOLOGY DOMAIN-CONTAINING | 35 | 679 | IPR045168 | - | |
Phac6g01850 | 696 | ProSiteProfiles | Zinc finger C3H1-type profile. | 121 | 148 | IPR000571 | GO:0046872 | |
Phac6g01850 | 696 | MobiDBLite | consensus disorder prediction | 406 | 471 | - | - | |
Phac6g01850 | 696 | MobiDBLite | consensus disorder prediction | 179 | 250 | - | - | |
Phac6g01850 | 696 | MobiDBLite | consensus disorder prediction | 19 | 61 | - | - | |
Phac6g01850 | 696 | MobiDBLite | consensus disorder prediction | 431 | 449 | - | - | |
Phac6g01850 | 696 | MobiDBLite | consensus disorder prediction | 582 | 600 | - | - | |
Phac6g01850 | 696 | CDD | YTH | 258 | 392 | IPR007275 | GO:0003723 | |
Phac6g01850 | 696 | MobiDBLite | consensus disorder prediction | 621 | 656 | - | - | |
Phac6g01850 | 696 | FunFam | Cleavage and polyadenylation specificity factor 30 kDa subunit | 62 | 123 | - | - | |
Phac6g01850 | 696 | MobiDBLite | consensus disorder prediction | 606 | 620 | - | - | |
Phac6g01850 | 696 | Gene3D | - | 62 | 125 | - | - | |
Phac6g01850 | 696 | ProSiteProfiles | YTH domain profile. | 257 | 392 | IPR007275 | GO:0003723 | |
Phac6g01850 | 696 | MobiDBLite | consensus disorder prediction | 657 | 690 | - | - | |
Phac6g01850 | 696 | ProSiteProfiles | Zinc finger C3H1-type profile. | 67 | 94 | IPR000571 | GO:0046872 | |
Phac6g01850 | 696 | SMART | c3hfinal6 | 95 | 121 | IPR000571 | GO:0046872 | |
Phac6g01850 | 696 | SMART | c3hfinal6 | 67 | 93 | IPR000571 | GO:0046872 | |
Phac6g01850 | 696 | SMART | c3hfinal6 | 123 | 147 | IPR000571 | GO:0046872 | |
Phac6g01850 | 696 | MobiDBLite | consensus disorder prediction | 406 | 420 | - | - | |
Phac6g01850 | 696 | SUPERFAMILY | CCCH zinc finger | 67 | 98 | IPR036855 | GO:0046872 | |
Phac6g01850 | 696 | Gene3D | ph1033 like domains | 236 | 395 | - | - | |
Phac6g01850 | 696 | MobiDBLite | consensus disorder prediction | 572 | 696 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac6g01850 | Phac-Chr6 | 19332662 | 19347849 | Dispersed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Phac6g01850 | YTH | 3.7e-45 | CL0178 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac6g01850 | K14404 | - | gmx:100802826 | 1173.69 |