Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01827 ATGATGGAGATCCAACTTTTCTTATCTTTCACTTTTTTTCAAGACGTTCTTAAGTTGATTCATACCAATCTAGTTAAGAGTGGTGTGAATGCTGAACTCATTTTGTTTGACAGCATTGTTTTTTATTCTCAGGTTTTGTCTGTGACATTGGATGACTGGTCAGAGGATGAAATAGACGCAATGATGGAGGTTGGGGGAAATGCTTCTGCTAATTCAATTTATGAAGCTTATATTCCTGAAGGACTTACAAAACCTGAACCAGATGCCGGTCACGAGCAGCGTTCAAAGTTCATAAGGTCAAAATATGAATTTCAAGAATTTCTGAAACCGAGTTTGCGCATTGTATCTGGAAAAAGCAGTACAGGATCAAATTCTGCCAAAAGTATTATCGATAGTTTTACAAGTACTAGCAGTACACAGAGACTGGAAGGTATGGTAGAATTTATTGGAATGTTGAAGGTGAAAGTGATTAAAGGCACAAATTTAGCTATCAGAGATATAAAGTCAAGTGATCCGTATGTCATTTTGACCCTTGGCCAGCAGACTGTCCAGACATCTGTAGCGAGGAGTAACTTGAATCCAGTCTGGAATGAGGAATACATGCTGTCTGTTCCAGAGCATTATGGACAGATGAAATTGAAAGCATTTGACTATGACACATTTTCCGCCGATGATATTATGGGAGATGCAGACATTGATCTTCAGTCTCTGATAACATCTGCTATGGCATTTGGAGATGCTGGAATGTTTGACGATATGCAGATAGGAAAATGGTTAAAATCCGATGACAATGCACTTATTGAGGATAGCACAGTCAATATTGTTGACGGTAAGGTTAAACAAATGATGTCACTAAAGCTCCAGAATGTTGAATCTGGAGAATTAGATCTTGAACTCCAGTGGATTCCTCTTGATCAATGA 921 0.3833 MMEIQLFLSFTFFQDVLKLIHTNLVKSGVNAELILFDSIVFYSQVLSVTLDDWSEDEIDAMMEVGGNASANSIYEAYIPEGLTKPEPDAGHEQRSKFIRSKYEFQEFLKPSLRIVSGKSSTGSNSAKSIIDSFTSTSSTQRLEGMVEFIGMLKVKVIKGTNLAIRDIKSSDPYVILTLGQQTVQTSVARSNLNPVWNEEYMLSVPEHYGQMKLKAFDYDTFSADDIMGDADIDLQSLITSAMAFGDAGMFDDMQIGKWLKSDDNALIEDSTVNIVDGKVKQMMSLKLQNVESGELDLELQWIPLDQ* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01827 306 SMART C2_3c 151 246 IPR000008 -
Phac6g01827 306 SMART arf_gap_3 14 115 IPR001164 GO:0005096
Phac6g01827 306 FunFam ADP-ribosylation factor GTPase-activating protein AGD12 148 306 - -
Phac6g01827 306 Pfam Putative GTPase activating protein for Arf 42 109 IPR001164 GO:0005096
Phac6g01827 306 CDD C2_ArfGAP 149 293 - -
Phac6g01827 306 ProSiteProfiles C2 domain profile. 131 247 IPR000008 -
Phac6g01827 306 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 146 243 IPR035892 -
Phac6g01827 306 Gene3D C2 domain 148 306 IPR035892 -
Phac6g01827 306 Gene3D Arf GTPase activating protein 27 113 IPR038508 -
Phac6g01827 306 SUPERFAMILY ArfGap/RecO-like zinc finger 42 110 IPR037278 -
Phac6g01827 306 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 42 306 IPR044518 GO:0005096|GO:0005543
Phac6g01827 306 Pfam C2 domain 151 240 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01827 Phac-Chr6 19137416 19143519 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01827 43 306 C2H2 Transcription Factor Family AT4G21160 69.597 3.22e-140 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01827 K12486 - gmx:100810806 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g01827 6 19137416 19143519 Phac6g01827 6 19137416 19143519 ECH