Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01790 ATGATTCTGCAACTACCATTTCTCGTCATCATCATGTTGATAACATTGCCTATATATCCTCTGGCATATTCTGCACATGAGATTATTATAGCAAAACCTGGGTGTAGTTCCATATGTGGAGGTGTTGAGATCTCTTACCCCTTTGGAATGAAAGATCCGAAATGCTACGTAGACAAGTGGTTTGAAGTCGAATGCAGAGAAACTTCTGACGGTCAAAAACCCTACCTAAAGTCTTTAAATCTGGAGGTGAGAGACCTTGGCATGCATCATGTTTATATATGGAATCCAATTTTCCATTGGAACTGCCCAAGCAGAAGAGCGAAGCCAGAGGTAATAAACCTGAGAGGAAGCCCTTTCGTGTATTCCCAGGGTGCCAACAAATTTATGTCCATTGGTTGCAACAACCTTGCTATTTTGCAGTCCAATGGGTCCAATGTTGCTTGTTGTGTGTCTATTTGTGATGACAGTGAAGAAGTCAACGATAACTTCAACTTGGTAAGAGAAGATAGTTGCAGTGGCAGGTACTGCTGCGAGACTTCACTGCCCAAGTATCTTTTAGAATATAACGCAACACTTCAAGATTTTAACACCCAAAACAATAATACTGTGAGTGAACCGTGTAGTTATGCGTTCATTGCATATGGGTACTCGCCAGTTACGTCTGATTTTAGCAATATGGATCATGTTCCTGCAATTCTTGAGTGGGAGATTTTGGACAACACACTCCACAATTCTACCCTTCAACTCCTTTCAGAATCAGATTATGTCACTTGTAATCGCTCTAATTTTACATCTTCGCGAAGCAAAGGTTGGAGATGCGACTGCTTAGAAGGCTTCTATGGCAATCCCTACCTTGCAGGAGGCTGCACTGCCTTCTCAGGTGACAATAACAGTCAAGCCAAGAAGTGGGCTATAGTAGGAGTTTCGTCAAGTGTGGGATCTATCATTTTCCTCCTTGGTCTATGGTTGTTTTATAAGGATGTAAGGAAGAGAGTGATAGAGAAACGCAAACAGAAGTTCTTCAAAAAGAATGGTGGTTTGTTGTTGCAACAAAGAATATCATCCAATGAAGCTAATCTAGACAAAGCTATTCTCTTTAGCTTAGATGATTTAGAGAAAGCCACTGACCACTTTAACATGAATAGAGTTGTTGGAAAAGGAGGGCAAGGTACTGTTTACAAAGGAATGCTGGTAGATGGTACAATTGTTGCAGTGAAAAAGTTTAAGGTGGAAGGAAATGTTGAAGAATTCATCAATGAGTTTGTCATTCTTTCACAAATTAACAATAGAAATGTGGTGAGGTTGTTAGGATGTTGTTTGGAGACAGAAATTCCCCTACTTGTTTATGAATTCATACCTAATGGTAATCTCTTTGAATATTTGCATGACCAAAACAAGGAGTTATTACCAATGACATGGGATATGTGTTTGAGAATTGCCACTGAGATTGCAGGAGCCATGTTTTACCTGCACTCAGTTGCATCTAAACCCATTTATCATAGAGATATCAAATCCACTAATATACTGTTAGATGAAAAATATAGGGCAAAAATTGCAGATTTTGGAACATCCCGAGTAATTTCTATTGAAGCTACTCATCTTACAACAGTTGTTCAAGGCACCTTTGGTTATTTGGATCCTGAATATTTTCACACTAGTCAATTTACAGAGAAAAGTGATGTCTACAGTTTTGGAGTAGTTCTTGCTGAACTTTTAACAGGCCAGAAGCCAATATCATCAGTAAGATCTGGAGAGTTCAAGAGTTTAGCTTCATATTTTGTTGAGTGTCTGGAAGAGGACAATCTGCTTGACATTATTGACAAGAGAATTGTGAAAGAAGCAGACAAAAGAGAAATCATTGCTGTTGCTAGCCTTGCCAATAGATGCTTAGAGTTGAATGGAAAGAAACGTCCAACTATGAAAGAAATCACATTTGAATTAGAAGAGATTCATAGATTGGTTAGAAAGTGTAATACAGAGAAAAACGGAGACGAATTTGAGATTGCTCGAGTTGAAGATTGTGATCCTTGGGATGGATATTCTACGTCAAAATCATGGGACTCGAAGGTAGATTGA 2076 0.3887 MILQLPFLVIIMLITLPIYPLAYSAHEIIIAKPGCSSICGGVEISYPFGMKDPKCYVDKWFEVECRETSDGQKPYLKSLNLEVRDLGMHHVYIWNPIFHWNCPSRRAKPEVINLRGSPFVYSQGANKFMSIGCNNLAILQSNGSNVACCVSICDDSEEVNDNFNLVREDSCSGRYCCETSLPKYLLEYNATLQDFNTQNNNTVSEPCSYAFIAYGYSPVTSDFSNMDHVPAILEWEILDNTLHNSTLQLLSESDYVTCNRSNFTSSRSKGWRCDCLEGFYGNPYLAGGCTAFSGDNNSQAKKWAIVGVSSSVGSIIFLLGLWLFYKDVRKRVIEKRKQKFFKKNGGLLLQQRISSNEANLDKAILFSLDDLEKATDHFNMNRVVGKGGQGTVYKGMLVDGTIVAVKKFKVEGNVEEFINEFVILSQINNRNVVRLLGCCLETEIPLLVYEFIPNGNLFEYLHDQNKELLPMTWDMCLRIATEIAGAMFYLHSVASKPIYHRDIKSTNILLDEKYRAKIADFGTSRVISIEATHLTTVVQGTFGYLDPEYFHTSQFTEKSDVYSFGVVLAELLTGQKPISSVRSGEFKSLASYFVECLEEDNLLDIIDKRIVKEADKREIIAVASLANRCLELNGKKRPTMKEITFELEEIHRLVRKCNTEKNGDEFEIARVEDCDPWDGYSTSKSWDSKVD* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01790 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 498 510 IPR008271 GO:0004672|GO:0006468
Phac6g01790 691 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 30 654 IPR045274 GO:0007166
Phac6g01790 691 Gene3D Transferase(Phosphotransferase) domain 1 452 674 - -
Phac6g01790 691 SMART serkin_6 378 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01790 691 Pfam Wall-associated receptor kinase galacturonan-binding 35 84 IPR025287 GO:0030247
Phac6g01790 691 Pfam Protein tyrosine and serine/threonine kinase 379 645 IPR001245 GO:0004672|GO:0006468
Phac6g01790 691 Gene3D Phosphorylase Kinase; domain 1 343 451 - -
Phac6g01790 691 FunFam Wall-associated receptor kinase 2 452 670 - -
Phac6g01790 691 FunFam Wall-associated receptor kinase 2 348 451 - -
Phac6g01790 691 CDD STKc_IRAK 384 650 - -
Phac6g01790 691 ProSiteProfiles Protein kinase domain profile. 378 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01790 691 SUPERFAMILY Protein kinase-like (PK-like) 360 647 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01790 Phac-Chr6 18860143 18863310 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01790 35 673 Receptor kinase-like Gene Family AT1G69730 41.940 5.93e-179 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Phac6g01790 PK_Tyr_Ser-Thr 7.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01790 - - gmx:100798794 976.467