Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01761 ATGTGCAGCTGCATCTTTGGGCCAATAATCATGGACAATTACCAAGGTGATTTAACTGACATAGTCCGAGCCAGTGGTGGAGCATATGGTGGTGGCAGCAGCAGCAGCTGCAGCACAGGCACTTCATCTGCTGAATTACCTACCACATCTCATCACCATACTATTATTACTCACAACCTCTCTCGTAATGATCACTGGCACCAACACTTCTCTTCTTCTTCTTCTTCTTCTTCTGACCCCATCACCTTCTCTTCTGTGCTTCAAGACCCCAGAGGACTCACCAACTTTGGTGACCCCTTCTCCACCATGAGAGATCCCTTCCTTCAGGAGCTTGGCATGCCCTCCGCTTCTGCCTACTTCACTGGGGGCTTGGAAGAAGCAGCTGCAAGTTTTGGTGCTGCTGCTGTTACTACTAATGCTAATACTAGTGCCACTGTTTTTGCTGCACACAAGATTCTTGAGGAGCATGACATGAGAAGACCTTGTAAAAACATATTCTCCAACATGATTCAGATCTCTCCCAATGCAAAGTTACCGGTCTCACCCTATGATTCCACCACACCCATGGCACCTTCTCCAAGGCCAATTAAACCTCCTGCTGTTGTTTCACCCAACATGGTTAATGCAAACTCCTCCAAGGATTGCCTTGTGGACACCACAGGAGTGCAGATCTCATCTCCACGGAATCCGGGCCTTAAACGAAGGAAGAACCAGGCCAAAAAGGTGGTTTGTATTCCTGCACCAGCAGCTGCAAACAGCAGACAAACCGGAGAGGTTGTTCCGTCAGATTTGTGGGCTTGGAGAAAATATGGTCAGAAACCCATTAAAGGTTCACCTTATCCCAGGGGTTACTACAGATGCAGCAGCTCAAAGGGTTGCTCTGCGAGGAAGCAAGTTGAGCGGAGCAGAACAGACCCAAACATGTTGGTTATTACATACACATCAGAGCACAACCATCCATGGCCAACTCAAAGAAATGCTCTGGCTGGTTCAACAAGGTCACAGCCATCCAAGAACAATGCTGGAAATTCAAAGAGCTCAGAAGGCTCAAACCCCCAAAAGAGCACAACAGCAAAAGCAAAGGATGATCAGCAGCAGGAGAGCAACACCAGTGAGGGCAATGTGTCCCCAGTTGTTGCTGGGAACTCAACAGCAAACAGTGCATCTGTGAAGGAGGAGAATATGGAAGACATAGAGAAGCAGTTTGAGATGGATGAGGGAGAGTTCAGTGATGGACTCCCTTACAAGCCTTGTTTGATGGATCAGAGTAATAATCAATCTGAGGATTTCTTTGCTGAGTTGGGAGAAATAGAAGCTGACCCACTGGATCTTTTGTTTACCCAAGGTTTTGGTGCAGCTGGTGATCAAAGGGAGGAATCCAAGGCCTTAGATCCATTCCATCTGTTTGACTGGTCAGGAGACAACAACACCAACACAAACACCAGTTCATTTGAAGAACCTAATACAAAGAGAAGGTTATAA 1482 0.4703 MCSCIFGPIIMDNYQGDLTDIVRASGGAYGGGSSSSCSTGTSSAELPTTSHHHTIITHNLSRNDHWHQHFSSSSSSSSDPITFSSVLQDPRGLTNFGDPFSTMRDPFLQELGMPSASAYFTGGLEEAAASFGAAAVTTNANTSATVFAAHKILEEHDMRRPCKNIFSNMIQISPNAKLPVSPYDSTTPMAPSPRPIKPPAVVSPNMVNANSSKDCLVDTTGVQISSPRNPGLKRRKNQAKKVVCIPAPAAANSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNAGNSKSSEGSNPQKSTTAKAKDDQQQESNTSEGNVSPVVAGNSTANSASVKEENMEDIEKQFEMDEGEFSDGLPYKPCLMDQSNNQSEDFFAELGEIEADPLDLLFTQGFGAAGDQREESKALDPFHLFDWSGDNNTNTNTSSFEEPNTKRRL* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01761 493 MobiDBLite consensus disorder prediction 278 395 - -
Phac6g01761 493 FunFam probable WRKY transcription factor 14 235 315 - -
Phac6g01761 493 MobiDBLite consensus disorder prediction 471 486 - -
Phac6g01761 493 MobiDBLite consensus disorder prediction 469 493 - -
Phac6g01761 493 ProSiteProfiles WRKY domain profile. 256 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac6g01761 493 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 16 445 IPR044810 GO:0003700
Phac6g01761 493 MobiDBLite consensus disorder prediction 305 391 - -
Phac6g01761 493 Gene3D WRKY domain 235 315 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac6g01761 493 Pfam WRKY DNA -binding domain 263 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac6g01761 493 Coils Coil 493 493 - -
Phac6g01761 493 SMART WRKY_cls 261 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac6g01761 493 SUPERFAMILY WRKY DNA-binding domain 259 322 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01761 Phac-Chr6 18706941 18711092 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01761 1 478 WRKY Transcription Factor Family AT1G30650 42.505 1.06e-97 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac6g01761 WRKY 2.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01761 - - aprc:113852911 777.319