Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01747 ATGGGTGCACCAAATGCTTTCAGATGTGGAAGAAGAGGAAGAACAATGGCTGGTAAAAGTTCAATTACTCAGCCAGCAACCAGACATGGCACCAACAAACTGACCAAAAATGACTTAGCTGATCTAGAATGGACCAATAGGATTCCAGAGTGTCCAACTTACTACCCATCAGAGCATGAGTTTGACCATCCTTTAGTTTATCTGCAGAAAATAGCTCCTGAGGCTTCTAAATATGGTATATGCAAAATTGTTTCTCCAATTGCAGCCTCAAATCCACCTGCTTTTGTCTTAATGAAAGAGAAAAGGGATTTCAAGTTTGAAACAAACTTACAGCCTCTCCGTCTTTCTAAATGGAATGAGAAGGATACAATAACCTTTTCTATGAGTGGCAGAAAATATACATATGAGGAATTTGAGGCTCTTGCAAACAAGACTTTTTTCAGTAGATTTAATTGTTCTGGAGGTCTTCCTTCTTCATGTGTGGAAAAGGAGTTCTGGCACGAGATGATGCATGGAAAGAAAGGAAAAGTTGAGTATGGAATCAATGTTGAAGGTAGTGCCTTTTCATGTGATCCTGATGACAGGCTTGGGACAAGTAAATGGAATTTGAAGAATTTCTCACGGCTACTGCAATCGCCGTTACGTTTAGTTGACATGGAAATTCCAGGAATAACTGATCCTATGCTTTACATTGGAATGCTGTTCAGTATGTTTGCATGGCATGTAGAAGATCATTATTTGTACAGCATAAATTATAATCACTCAGGTGCAAGTAAAACTTGGTACGGCGTGCCTGGCTATGCAGCCTCTCAATTTGAAAAGATTGTCTTACAACATGTGTATTGCAATAAGATCTTAACAAAACATGGAGAGGATGGAGCTTTCAGATTTCTTGCACAAAAAACAACCATGTTCCCACCAAATGTCATGTTACAACATGATGTGGAAGTTTACAAGGCTGTACAGAATCCAGGAGAGTTTATCATCACCTTTCCTAGAGCATATCATGCTGGATTTAGTCATGGTTTTAACTGTGGAGAAGCGGTAAACTTTGCTAATGATGAGTGGTTTCCTCTTGGAGCTGCAGCTAGCAGGCGTTATGCACTTCTCAGAATGATGCCTTTAATTCCATATGAGGAACTTCTTTGTAAAGAAGCAATGTTTGTTTACAAGTCCTCAAGGGTCAGAAGTTCCAAGAACAAGCCTGAAGACAAAGCATCTTATAATGCTATAGTGCAGCCTTTCTTGCATCTTATGCAATTTTATATGACATCCCTTTTGCAACAGAAGAGTTCAAGAAACTTGCAAAGGTCTTCCAATACATCAGGTTTGGTGATATGTCGCATATGCCACAGGGATTGTTATGTAGCTTACCTGCTGTGCAAATACTGCTTTTCTCATCCGATTTGTCTTTTCCATGACATTGCACCACATACTTGTATATGTGGAAGATTTTATTCTATTTTCAAAAGGAATGACATTTTCGAACTCGAAGAAGCCGCCAAAAGTTTTCAACAGGAAAAAAAGTGCAACGAGACATTCTCTCTATCAAGTATTTTCTCCTGTTACAGAAATGAATGCATCAAACATCTTGAGGATCATCCTTGGCACGAAGAAAACAGTGTAAGTGGAACTGCTAATTCTACAGGGGCAGCATCTAAACCAAAAACAAAAATAGCTGACTGCATTAAGCACAGTGTTGAAAATAAGACAAGAATGCTGCATTGGAGAAACTATGGGCTTCCATCTGTGAAGGGTACCAATAGGCCAGAAATCGTTTATAACCTGAGAAAAAGGAAATCAAATTGA 1809 0.3897 MGAPNAFRCGRRGRTMAGKSSITQPATRHGTNKLTKNDLADLEWTNRIPECPTYYPSEHEFDHPLVYLQKIAPEASKYGICKIVSPIAASNPPAFVLMKEKRDFKFETNLQPLRLSKWNEKDTITFSMSGRKYTYEEFEALANKTFFSRFNCSGGLPSSCVEKEFWHEMMHGKKGKVEYGINVEGSAFSCDPDDRLGTSKWNLKNFSRLLQSPLRLVDMEIPGITDPMLYIGMLFSMFAWHVEDHYLYSINYNHSGASKTWYGVPGYAASQFEKIVLQHVYCNKILTKHGEDGAFRFLAQKTTMFPPNVMLQHDVEVYKAVQNPGEFIITFPRAYHAGFSHGFNCGEAVNFANDEWFPLGAAASRRYALLRMMPLIPYEELLCKEAMFVYKSSRVRSSKNKPEDKASYNAIVQPFLHLMQFYMTSLLQQKSSRNLQRSSNTSGLVICRICHRDCYVAYLLCKYCFSHPICLFHDIAPHTCICGRFYSIFKRNDIFELEEAAKSFQQEKKCNETFSLSSIFSCYRNECIKHLEDHPWHEENSVSGTANSTGAASKPKTKIADCIKHSVENKTRMLHWRNYGLPSVKGTNRPEIVYNLRKRKSN* 603
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01747 602 Gene3D Cupin 51 414 - -
Phac6g01747 602 SUPERFAMILY Clavaminate synthase-like 201 385 - -
Phac6g01747 602 ProSiteProfiles JmjN domain profile. 51 92 IPR003349 -
Phac6g01747 602 MobiDBLite consensus disorder prediction 1 32 - -
Phac6g01747 602 MobiDBLite consensus disorder prediction 17 32 - -
Phac6g01747 602 Pfam jmjN domain 52 84 IPR003349 -
Phac6g01747 602 FunFam Lysine-specific demethylase isoform A 46 395 - -
Phac6g01747 602 Pfam JmjC domain, hydroxylase 228 351 IPR003347 -
Phac6g01747 602 ProSiteProfiles JmjC domain profile. 195 368 IPR003347 -
Phac6g01747 602 SMART JmjN_1 50 91 IPR003349 -
Phac6g01747 602 PANTHER LYSINE-SPECIFIC DEMETHYLASE 43 543 - -
Phac6g01747 602 SMART cupin_9 195 368 IPR003347 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phac6g01747 Phac-Chr6 18605354 18609344 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01747 4 507 JUMONJI Transcription Factor Family AT2G34880 29.545 4.14e-60 212
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Phac6g01747 JmjC 1.5e-38 CL0029
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01747 - - gmx:100809650 951.429