Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01704 ATGGCGGAGGAGAAAAGAGAGGAAGAACCGCACCCGAACAGCGAACCATCCACCACCATGGCATTCTCCGACGAGATTCCCAACAACTTCACTTTCCCTTTCCAACCACCGACCATCTTCGACGTCATGCCGCCGCCGTCCTTGTCTTCTTCCTGCGACCACAAGGCCTCGCCCTTCGGCTTCTTGGAACTGCTCGGCGTCCACGACTACAACGCGCCGCTGTTCGATTGGCTCCCCGCGGCTGCGCCGTCGCGGGTTTGCTCCAAAGTGCCGGACTTCTCCGAGGTGCTGAACACTCCCGCGTCGCCCAACTTATCGTCGATTTCGTCGTCTTCTAATGAGGCCACCACCACCGCCACCACCACCACCGCGGAGCAGAGTGGTAAAGGTGGGATTGAACACGAGGAAGGTGAAGCAGAGGAGGAAGAAGAAGGTGGTAATGGAGGCAGAGATGACCAGGATCAAGACAAGACTAAGAAACAGTTGAAACCGAAGAAGAAGAACCAAAAGAAGCAAAGAGAACCGAGATTTGCGTTCATGACAAAGAGCGAGGTTGATCACCTAGACGATGGTTATAAGTGGCGCAAGTACGGCCAAAAAGCTGTGAAAAACAGCCCTTATCCCAGGAGCTACTACCGTTGCACCACCGCCGGTTGCGGCGTGAAGAAGCGAGTGGAGCGTTCCTCCGATGACCCTTCCATCGTGGTTACCACCTACGAGGGGCAGCACACGCACCCTTGCCCTGCTTCGTCTCGGGCTGGCTTCGGGTTCGTGAACGAGCCTGGTGGATTGGGACATTCCGGTACCTTCGGTTCCTCACAGTTCGTGCTGCCACATCAGCACCAACACCAACCACAAGCTTCGGCTTTGATATATAACTCCAACCCACTTTTTGTTAACTCCGGTAGTAACTTCATGAACACGACGTCGTTTGGTGGGTTTGGTCAGGACCACGCGAACCGTCGAGGTTTCGGACACGAGGCTTTGTCGAGAGACAATGGGTTGCTTCAGGACATTATTGTGCCATCGCAGGTGAGGAAGGAGGAGAAGGATTGA 1056 0.5502 MAEEKREEEPHPNSEPSTTMAFSDEIPNNFTFPFQPPTIFDVMPPPSLSSSCDHKASPFGFLELLGVHDYNAPLFDWLPAAAPSRVCSKVPDFSEVLNTPASPNLSSISSSSNEATTTATTTTAEQSGKGGIEHEEGEAEEEEEGGNGGRDDQDQDKTKKQLKPKKKNQKKQREPRFAFMTKSEVDHLDDGYKWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSDDPSIVVTTYEGQHTHPCPASSRAGFGFVNEPGGLGHSGTFGSSQFVLPHQHQHQPQASALIYNSNPLFVNSGSNFMNTTSFGGFGQDHANRRGFGHEALSRDNGLLQDIIVPSQVRKEEKD* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01704 351 Gene3D WRKY domain 172 249 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac6g01704 351 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 100 281 IPR044810 GO:0003700
Phac6g01704 351 MobiDBLite consensus disorder prediction 100 128 - -
Phac6g01704 351 FunFam WRKY transcription factor 57 174 248 - -
Phac6g01704 351 MobiDBLite consensus disorder prediction 1 27 - -
Phac6g01704 351 SUPERFAMILY WRKY DNA-binding domain 180 248 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac6g01704 351 Pfam WRKY DNA -binding domain 189 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac6g01704 351 ProSiteProfiles WRKY domain profile. 183 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac6g01704 351 SMART WRKY_cls 188 247 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac6g01704 351 MobiDBLite consensus disorder prediction 100 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01704 Phac-Chr6 18303528 18306392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01704 158 348 WRKY Transcription Factor Family AT5G49520 58.049 5.97e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac6g01704 WRKY 3.8e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01704 - - gmx:100812252 411.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g01704 6 18303528 18306392 Phac6g01704 6 18303528 18306392 ECH