Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01694 ATGGCTAATCTTCCTTCATGCTCTTCTTTTCTTCTTTCATCATTCATAGTTGCATTTCTCATTTCTTGCATCTCACATTCTGCCCTTGCCGAAAAGGGAAAAAAAGTCACCTCACCTATGTTGACAGAAAAGTTAGGAATTAATCGTACTATCAAAGTAGATGGCAATGGCAATGGGGAGTTCAAAACTATCCAAGCTGCCATAGATTCCATTCCTGAAGAAAATTCGAATTGGATAATTGTTCATCTTAGGAAAGGACTATACAGAGAAAAAGTGCACATACCAGAGAATAAGCCTTATATATTCTTGAGAGGGAATGGGAGAGGAAGAACTGGTATAGTTTGGTCTCAGAGTTCTACAGACAACGTGGCTTCTGCGACCTTTAGAGTCGAAGCACACGACTTCATTGCCTTTGGAATTACCTTCCAGAATGAGGCACCTACGGGGGTTGCTTATACCTCGCAAAACCAATCGGTGGCAGCATATGTGGCAGCAGACAAAGTGGCATTTTATCATTGTTCGTTTTACAGTACTCACAACACTCTCTTTGATCAAAAAGGTAGACATTACTATGATAACTGCTACATTCAAGGATCAATTGATTTCATATTTGGTCGTGCCAGAACAATCTTCCATGAAGCTGAAATATTTGTGGTAGATGATAAAAGGTTAACGATTCAAGGTTCAATCACGGCTCATAATAGGGAAAATGCAGATGAGCTGAATGGATATATCTTCATCAAAGGCAAGGTTTATGGCATTGGTGAAGTTTACCTAGGAAGAGCCAAGGGTCCTTATTCTAGGGTGATTTTTTCTGAGACATATCTCTCCAAGACCATTGTCCCAGCGGGGTGGACCAATTGGAGCCATGGTGGTAGCACAGAAAATCTAGTCCATGCGGAGTACAATTGCCATGGACCTGGTGCTGTGACAAAGGGACGTGCTCCTTGGTCGTTGCAGCTAACTAAGGAAGAAGTTGCGCCCTTTTTATCTATTGACTATATTGATGGCAAAAATTGGTTGCCAGTATGGCTGTAA 1038 0.4143 MANLPSCSSFLLSSFIVAFLISCISHSALAEKGKKVTSPMLTEKLGINRTIKVDGNGNGEFKTIQAAIDSIPEENSNWIIVHLRKGLYREKVHIPENKPYIFLRGNGRGRTGIVWSQSSTDNVASATFRVEAHDFIAFGITFQNEAPTGVAYTSQNQSVAAYVAADKVAFYHCSFYSTHNTLFDQKGRHYYDNCYIQGSIDFIFGRARTIFHEAEIFVVDDKRLTIQGSITAHNRENADELNGYIFIKGKVYGIGEVYLGRAKGPYSRVIFSETYLSKTIVPAGWTNWSHGGSTENLVHAEYNCHGPGAVTKGRAPWSLQLTKEEVAPFLSIDYIDGKNWLPVWL* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01694 345 ProSitePatterns Pectinesterase signature 2. 196 205 IPR033131 -
Phac6g01694 345 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 48 341 - -
Phac6g01694 345 Gene3D - 45 344 IPR012334 -
Phac6g01694 345 FunFam Pectinesterase 46 345 - -
Phac6g01694 345 Pfam Pectinesterase 52 337 IPR000070 GO:0030599|GO:0042545
Phac6g01694 345 SUPERFAMILY Pectin lyase-like 47 343 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01694 Phac-Chr6 18216435 18218405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01694 48 341 Carbohydrate Esterase AT5G47500 36.184 1.51e-70 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01694 - - gmx:100792967 576.63