Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01689 ATGGGAACCCCAGAAGAAGAAGAAGAAGAAGAGAAGCTTCTCAAAAAGATAGAACGTCTCGAAGAGGGTCACGCTCACCTCAAGCAAGAAATGTCCAACTTCCAGCTGCTTCAAAACCACAGGTCTCATTCTAGGTTTGGTGCTGCTACGTCTAACCAACCCTCTTCTTCTTCTCTGCATCAAAATGGAAACAAGTATCTCAATATCTTGCAGTCAATGGGCCACTCTGTTCATGTTTTGGATCTTCAATGTCGTGTCATGTACTGGAACCCTAGTGCTGAAAATCTGTATGGCTATGCGGCAGAAGAGGTTCTTGGGAGGGATGGGATTGAGATGCTGGTGGATCCCAGGGATTTTGGTTTGGCCAATGATGTGTTCAACCATGTCAAAATGGGAGAGAGTTGGAGAGGCCAGTTCCCTGTTAAGAATAAGAAAGGCGATAGGTTCTATGCCGTGGCAACCAATACACCTTTCTATGATGATGATGGAAGCTTGGTTGGGGTTATTTGCGTCTCCTGTGATTCACGGCCCTTTGTTGAATCCAGAATTCCCTTTCTAGGAGCAGAGAGTGCAGAATCTGTATCGGGTTCCAATGGTCGTAGGAGTAGCATTTCAGATAAACTTGGCCTTGACTCTCAGCAGCCACTTCAAGTTGCTCTGGCTTCGAAAATTTCAAATTTGGCTTCAAAGATGAGTAACAAAGTTAAGTCCAGAATCCGGACAGGAGAAAATAATCGGGAAGGTGGGAGTGGAGAAAGTCGTCATTCTGAGCATAGTTTGTTGGAATGTGCTGTTTCTGACCCGAGAGAAGATGGTAATTCCAGTGGGGCTAGCACGCCCAGAGGAGATGTGCAAAAATCTCCTTTTGGTGCCTTTTCTCATGCTGAAGAGAAATCCCAAGGGAGAACTATGAGAGACTCCAATGATCAGAGTGAAGGAAAACCTATTCACAAGATCATAACTTCTAAGGCTGAAACATGGATTCAAAAGAAAACATTGTCATGGCCTTGGAGAGCAAGTGATCAGGAAGGATCTGAGGCAAGGAATGTTCATGTTGCTTCCCCTTGGTTGCAGGGTGACCAAGAGAATGAGTCGGTTAATCAGAATAATCTTTCTTCTGGGTTGAAGCGAGAAAGCCAGGCAGGCGAAAGCAATGGACCTGTTACTAACGAGGCTTCAGGATCCTGGTCCTCGTTTGTTAATGTTAACAGCACAAGTAGTACCAGCAGCTGTGGCAGTGGCAGTAGTTGTGCTGCCAATAATAAAGTGGATGTTGACTCCGATTGCTTGGATTATGAAATTTTGTGGGAGGACTTGACAGTTGGAGAACAAATTGGACAAGGTTCTTGTGGAACTGTATATCATGCTCTGTGGTATGGATCGGATGTTGCTGTCAAGGTTTTCTCAAAGCAAGAATATTCAGATGATGTGCTACTGTCCTTCAGACAAGAGGTGTCTGTCATGAAAAGACTTCGTCATCCAAATATTATTCTCTTTATGGGGGCTGTGACTTCACCTCAACATTTATGCATTGTAACAGAGTTTCTCCCACGGGGAAGCTTATTTCGATTGCTTCAGAGAAACACATCCAAACTAGAGTGGAGACGGAGAGTTCATATGGCCTTAGATATTGTTGGTGATTTTGGGCTTTCCCGTCTTAAACATGAAACATATCTCACTACTAAGACAGGAAAAGGCACGCCTCAATGGATGGCACCAGAAGTTCTTCGTAATGAACTGTCAGATGAGAAGTCTGATGTTTACAGCTTTGGGGTGATATTGTGGGAAATTACAACTGAAAAGATCCCTTGGGATACTCTCAACCCAATGCAGGTTATTGGAGCTGTAGGGTTTATGAACCATCGACTAGAAATTCCAGAAGATGTTGATCCACAGTGGGCTTGTATAATTGAGAGCTGCTGGCACAGTGATCCAGTTTGCCGACCAACATTCCAGGAACTGGTGGAAAGGCTTAGAGAACTGCATAGACAGTATGCAATTCAATTCCAGGCAGCTCGATCTGCCGAGGAAGGCACTCAAAAGGAGTTCTCTAGCAAATAG 2061 0.4449 MGTPEEEEEEEKLLKKIERLEEGHAHLKQEMSNFQLLQNHRSHSRFGAATSNQPSSSSLHQNGNKYLNILQSMGHSVHVLDLQCRVMYWNPSAENLYGYAAEEVLGRDGIEMLVDPRDFGLANDVFNHVKMGESWRGQFPVKNKKGDRFYAVATNTPFYDDDGSLVGVICVSCDSRPFVESRIPFLGAESAESVSGSNGRRSSISDKLGLDSQQPLQVALASKISNLASKMSNKVKSRIRTGENNREGGSGESRHSEHSLLECAVSDPREDGNSSGASTPRGDVQKSPFGAFSHAEEKSQGRTMRDSNDQSEGKPIHKIITSKAETWIQKKTLSWPWRASDQEGSEARNVHVASPWLQGDQENESVNQNNLSSGLKRESQAGESNGPVTNEASGSWSSFVNVNSTSSTSSCGSGSSCAANNKVDVDSDCLDYEILWEDLTVGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVLLSFRQEVSVMKRLRHPNIILFMGAVTSPQHLCIVTEFLPRGSLFRLLQRNTSKLEWRRRVHMALDIVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNELSDEKSDVYSFGVILWEITTEKIPWDTLNPMQVIGAVGFMNHRLEIPEDVDPQWACIIESCWHSDPVCRPTFQELVERLRELHRQYAIQFQAARSAEEGTQKEFSSK* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01689 686 FunFam PAS domain-containing protein tyrosine kinase 432 516 - -
Phac6g01689 686 SUPERFAMILY PYP-like sensor domain (PAS domain) 68 171 IPR035965 -
Phac6g01689 686 NCBIfam PAS domain S-box protein 65 171 IPR000014 -
Phac6g01689 686 MobiDBLite consensus disorder prediction 356 394 - -
Phac6g01689 686 Pfam PAS fold 66 171 IPR013767 GO:0006355
Phac6g01689 686 SUPERFAMILY Protein kinase-like (PK-like) 429 658 IPR011009 -
Phac6g01689 686 Gene3D PAS domain 75 176 - -
Phac6g01689 686 MobiDBLite consensus disorder prediction 355 394 - -
Phac6g01689 686 MobiDBLite consensus disorder prediction 298 319 - -
Phac6g01689 686 SMART pas_2 64 131 IPR000014 -
Phac6g01689 686 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 250 544 - -
Phac6g01689 686 Gene3D Phosphorylase Kinase; domain 1 432 516 - -
Phac6g01689 686 ProSiteProfiles Protein kinase domain profile. 439 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01689 686 Gene3D Transferase(Phosphotransferase) domain 1 517 686 - -
Phac6g01689 686 Coils Coil 10 37 - -
Phac6g01689 686 MobiDBLite consensus disorder prediction 232 322 - -
Phac6g01689 686 Pfam Protein tyrosine and serine/threonine kinase 439 544 IPR001245 GO:0004672|GO:0006468
Phac6g01689 686 Pfam Protein tyrosine and serine/threonine kinase 545 658 IPR001245 GO:0004672|GO:0006468
Phac6g01689 686 CDD PAS 77 174 IPR000014 -
Phac6g01689 686 CDD STKc_MAP3K-like 445 658 - -
Phac6g01689 686 ProSiteProfiles PAS repeat profile. 62 133 IPR000014 -
Phac6g01689 686 MobiDBLite consensus disorder prediction 236 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01689 Phac-Chr6 18201419 18207189 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01689 6 675 MAP Kinase Kinase Kinase AT3G06620 53.604 0.0 775
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Phac6g01689 PK_Tyr_Ser-Thr 2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01689 - - gmx:100815858 1097.42