Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01688 ATGGGAACCCCAGAAGAAGAAGAAGAAGAAGAGAAGCTTCTCAAAAAGATAGAACGTCTCGAAGAGGGTCACGCTCACCTCAAGCAAGAAATGTCCAACTTCCAGCTGCTTCAAAACCACAGGTCTCATTCTAGGTTTGGTGCTGCTACGTCTAACCAACCCTCTTCTTCTTCTCTGCATCAAAATGGAAACAAGTATCTCAATATCTTGCAGTCAATGGGCCACTCTGTTCATGTTTTGGATCTTCAATGTCGTGTCATGTACTGGAACCCTAGTGCTGAAAATCTGTATGGCTATGCGGCAGAAGAGGTTCTTGGGAGGGATGGGATTGAGATGCTGGTGGATCCCAGGGATTTTGGTTTGGCCAATGATGTGTTCAACCATGTCAAAATGGGAGAGAGTTGGAGAGGCCAGTTCCCTGTTAAGAATAAGAAAGGCGATAGGTTCTATGCCGTGGCAACCAATACACCTTTCTATGATGATGATGGAAGCTTGGTTGGGGTTATTTGCGTCTCCTGTGATTCACGGCCCTTTGTTGAATCCAGAATTCCCTTTCTAGGAGCAGAGAGTGCAGAATCTGTATCGGGTTCCAATGGTCGTAGGAGTAGCATTTCAGATAAACTTGGCCTTGACTCTCAGCAGCCACTTCAAGTTGCTCTGGCTTCGAAAATTTCAAATTTGGCTTCAAAGATGAGTAACAAAGTTAAGTCCAGAATCCGGACAGGAGAAAATAATCGGGAAGGTGGGAGTGGAGAAAGTCGTCATTCTGAGCATAGTTTGTTGGAATGTGCTGTTTCTGACCCGAGAGAAGATGGTAATTCCAGTGGGGCTAGCACGCCCAGAGGAGATGTGCAAAAATCTCCTTTTGGTGCCTTTTCTCATGCTGAAGAGAAATCCCAAGGGAGAACTATGAGAGACTCCAATGATCAGAGTGAAGGAAAACCTATTCACAAGATCATAACTTCTAAGGCTGAAACATGGATTCAAAAGAAAACATTGTCATGGCCTTGGAGAGCAAGTGATCAGGAAGGATCTGAGGCAAGGAATGTTCATGTTGCTTCCCCTTGGTTGCAGGGTGACCAAGAGAATGAGTCGGTTAATCAGAATAATCTTTCTTCTGGGTTGAAGCGAGAAAGCCAGGCAGGCGAAAGCAATGGACCTGTTACTAACGAGGCTTCAGGATCCTGGTCCTCGTTTGTTAATGTTAACAGCACAAGTAGTACCAGCAGCTGTGGCAGTGGCAGTAGTTGTGCTGCCAATAATAAAGTGGATGTTGACTCCGATTGCTTGGATTATGAAATTTTGTGGGAGGACTTGACAGTTGGAGAACAAATTGGACAAGGTTCTTGTGGAACTGTATATCATGCTCTGTGGTATGGATCGGATGTTGCTGTCAAGGTTTTCTCAAAGCAAGAATATTCAGATGATGTGCTACTGTCCTTCAGACAAGAGGTGTCTGTCATGAAAAGACTTCGTCATCCAAATATTATTCTCTTTATGGGGGCTGTGACTTCACCTCAACATTTATGCATTGTAACAGAGTTTCTCCCACGGGGAAGCTTATTTCGATTGCTTCAGAGAAACACATCCAAACTAGAGTGGAGACGGAGAGTTCATATGGCCTTAGATATTACATCTATTCTTGGAGCAATACTAGTAGATTTCGACTTCAACTTCAATTTGTTATCTTAG 1692 0.4403 MGTPEEEEEEEKLLKKIERLEEGHAHLKQEMSNFQLLQNHRSHSRFGAATSNQPSSSSLHQNGNKYLNILQSMGHSVHVLDLQCRVMYWNPSAENLYGYAAEEVLGRDGIEMLVDPRDFGLANDVFNHVKMGESWRGQFPVKNKKGDRFYAVATNTPFYDDDGSLVGVICVSCDSRPFVESRIPFLGAESAESVSGSNGRRSSISDKLGLDSQQPLQVALASKISNLASKMSNKVKSRIRTGENNREGGSGESRHSEHSLLECAVSDPREDGNSSGASTPRGDVQKSPFGAFSHAEEKSQGRTMRDSNDQSEGKPIHKIITSKAETWIQKKTLSWPWRASDQEGSEARNVHVASPWLQGDQENESVNQNNLSSGLKRESQAGESNGPVTNEASGSWSSFVNVNSTSSTSSCGSGSSCAANNKVDVDSDCLDYEILWEDLTVGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVLLSFRQEVSVMKRLRHPNIILFMGAVTSPQHLCIVTEFLPRGSLFRLLQRNTSKLEWRRRVHMALDITSILGAILVDFDFNFNLLS* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01688 563 ProSiteProfiles Protein kinase domain profile. 439 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01688 563 MobiDBLite consensus disorder prediction 356 394 - -
Phac6g01688 563 Pfam PAS fold 66 171 IPR013767 GO:0006355
Phac6g01688 563 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 238 545 - -
Phac6g01688 563 SUPERFAMILY PYP-like sensor domain (PAS domain) 68 171 IPR035965 -
Phac6g01688 563 MobiDBLite consensus disorder prediction 298 319 - -
Phac6g01688 563 MobiDBLite consensus disorder prediction 355 394 - -
Phac6g01688 563 SMART pas_2 64 131 IPR000014 -
Phac6g01688 563 Coils Coil 10 37 - -
Phac6g01688 563 Gene3D Phosphorylase Kinase; domain 1 432 516 - -
Phac6g01688 563 MobiDBLite consensus disorder prediction 232 322 - -
Phac6g01688 563 CDD PAS 77 174 IPR000014 -
Phac6g01688 563 ProSiteProfiles PAS repeat profile. 62 133 IPR000014 -
Phac6g01688 563 FunFam PAS domain-containing protein tyrosine kinase 432 516 - -
Phac6g01688 563 MobiDBLite consensus disorder prediction 236 265 - -
Phac6g01688 563 Gene3D PAS domain 75 176 - -
Phac6g01688 563 Pfam Protein tyrosine and serine/threonine kinase 439 545 IPR001245 GO:0004672|GO:0006468
Phac6g01688 563 NCBIfam PAS domain S-box protein 65 171 IPR000014 -
Phac6g01688 563 SUPERFAMILY Protein kinase-like (PK-like) 428 546 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01688 Phac-Chr6 18201419 18207189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01688 6 545 MAP Kinase Kinase Kinase AT3G06620 51.833 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Phac6g01688 PK_Tyr_Ser-Thr 1.3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01688 - - gmx:100815858 848.58