Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01608 ATGCAAGTGTATGACCCAGATGATTGCCTTCCAAAACGTCTTCTAAGCCTCAACCTTTCAGGTTCTCCCTTCATTGTTGCCTCTTCACTCCGCAACTACACCCTCTTAAGCTGCCCAACTCGGCGCACGGGGTCTCAATTCATTCCCATTGACTGTCTCAGCAATTCAACATCTTTTGTGTCAGCTATTCCTTCTGTCAACTTCACCAATTCATTGCTCCAGTCTTGCCATGTTCTAAAGAAACTCTCATTTCCAGTCGCAGGGCTGGGACCAAATCAGGAAACTTTCAGAGATGACCTCCTTACTGGAGATCTTCTATTAGCATGGTATGCACCTGACTGTAGATACTGCGAATTACAAGAAGCCATGTGCGGATTTGAGAGCATAAACAGTGATCAAGTTCGTTGTTTCTCTGATTACCAAACTGGGCGTCCACAACATGGTCTTCGAGTTTTTGGAATCATCACATTATCCACTGTTGGACCAGCTATCATATGCGCCATTGGAATGGCATGCTACGCCTCCTTCATGTACAGAAGAAGCAGCACAGCCAGAATTGGTGCAGCACAGAGTTCTACACCAACTGGCATGTCACCTCAACCTGCCATTGTTAGGATGGGCTTGGATGAGTCTACAATCGAGTCGTATCAGAAACTGGAACTGGGGGAGAGCAGAAGAGTGCCAGGACCTAATGAGGGATGTTGCACCATATGCCTCTCAGAGTATAAAGCCAAAGACACGATAAGATGCATTCCTGAATGTTCACATTGCTTCCATGCCGACTGCATCGATGAATGGCTTCGCATGAACAGTACATGCCCTCTTTGTCGCAACTCTCCTTCCCATCCCTCTACTGTTCTACCTATGTCCACTCACCATTGA 882 0.4671 MQVYDPDDCLPKRLLSLNLSGSPFIVASSLRNYTLLSCPTRRTGSQFIPIDCLSNSTSFVSAIPSVNFTNSLLQSCHVLKKLSFPVAGLGPNQETFRDDLLTGDLLLAWYAPDCRYCELQEAMCGFESINSDQVRCFSDYQTGRPQHGLRVFGIITLSTVGPAIICAIGMACYASFMYRRSSTARIGAAQSSTPTGMSPQPAIVRMGLDESTIESYQKLELGESRRVPGPNEGCCTICLSEYKAKDTIRCIPECSHCFHADCIDEWLRMNSTCPLCRNSPSHPSTVLPMSTHH* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01608 293 Pfam Ring finger domain 235 277 IPR001841 -
Phac6g01608 293 SUPERFAMILY RING/U-box 234 283 - -
Phac6g01608 293 SMART ring_2 235 276 IPR001841 -
Phac6g01608 293 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 199 282 IPR013083 -
Phac6g01608 293 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 281 IPR046948 -
Phac6g01608 293 CDD RING-H2_EL5-like 234 277 - -
Phac6g01608 293 ProSiteProfiles Zinc finger RING-type profile. 235 277 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01608 Phac-Chr6 17694148 17696743 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01608 1 281 C3H Transcription Factor Family AT2G25410 43.103 2.43e-70 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01608 - - gmx:100799895 474.937