Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01590 ATGGGACCCTTTGAATTTGTGGCGTGCAGGAAGACCATGCCTAGATGGACGGAGCAAGTGAAGATTTGCTCAAGTACAGGACTCGAGGGGTCTTTGGATGATGGATATAGCTGGAGAAAATACGGGCAGAAGGATATTCTTGGAGCTAAGTTTCCAAGAGGATATTACAGATGCACACATAGAAATGTTCAAGGGTGCCTGGCAACAAAACAAGTTCAAAGGTCAGATGAAGATCCAACAACAATTGAGGTGACCTACAGAGGAAGACATACGTGCACGCAAGCTAAGTATTTGAACAAGTCATACCCCTTAAACATAAAGATGGGTTTGGGGGAAAATCAATTCCACAATGATCAAAATAATCAACCACTTCACGAGAAAACACAACAAACCCCAGCGGGGATTTTTGCCTTTGAAACAGAGCATATAGTCAAAACTGAGGAATTGGAAATCAAGGAGGATATCTTTACATGGTTTTCATTTCCTTCTCAATCAAATGGATCAGAAAACGAGGACAACACGTTACCCGAGTCGACGCTTGAAAACCATTTCACTGAAAGCTTTTCTCCTGTATTCATATCACCAGCGACTTCAGAATCAAACCCTTTGTGTTTGTCAGCATGCCACTTGGACAGCACTGAACTGTTATGCCAACATATACAAACCTCGGACAACACTGATATCACTGAGACAGTTTCAGCCCCAACTTCAGTAACCAACTCCCCAATTCTGGATTTAGACATTTGGCTTCATAAAGGGGATTTTGACATAGATTTCCCTTTCAACACCCCTGATTTTTTCTCTTTATTCGAACTTCCTGCACTTCCACTTAGATAG 837 0.4194 MGPFEFVACRKTMPRWTEQVKICSSTGLEGSLDDGYSWRKYGQKDILGAKFPRGYYRCTHRNVQGCLATKQVQRSDEDPTTIEVTYRGRHTCTQAKYLNKSYPLNIKMGLGENQFHNDQNNQPLHEKTQQTPAGIFAFETEHIVKTEELEIKEDIFTWFSFPSQSNGSENEDNTLPESTLENHFTESFSPVFISPATSESNPLCLSACHLDSTELLCQHIQTSDNTDITETVSAPTSVTNSPILDLDIWLHKGDFDIDFPFNTPDFFSLFELPALPLR* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01590 278 SMART WRKY_cls 32 94 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac6g01590 278 ProSiteProfiles WRKY domain profile. 27 90 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac6g01590 278 FunFam WRKY transcription factor 53 18 95 - -
Phac6g01590 278 SUPERFAMILY WRKY DNA-binding domain 31 94 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac6g01590 278 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 10 206 IPR044810 GO:0003700
Phac6g01590 278 Pfam WRKY DNA -binding domain 33 92 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac6g01590 278 Gene3D WRKY domain 18 95 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01590 Phac-Chr6 17635216 17638138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01590 3 104 WRKY Transcription Factor Family AT5G24110 57.843 6.47e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac6g01590 WRKY 3.5e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01590 - - gmx:100790050 425.246