Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01572 ATGGAAACAATACTGAGTGAGGAGAAAGTTGTCACTTACATGCATGTCAAACATGGCATTTTGAACCAAACACCAAAGGTAGTTAGGATTTCGACGATGGATCCCTATGCCACAGATGATGAAGATGAAGGGTTGGTTAACCTTCCCAAAATAAAGAAGATTGTGAATGAGATCAGAATTGTGGAGAAGAAGCCTTCAACCACGGTGTCAATGAACCAACTTTACAAGGAAAAAACTGAAGAGCGTGGTAGAAGAAAACTTAGAGGAGTTCGTCAAAGGCCATGGGGAAGATGGGCTGCAGAAATAAGAGATCCTGTGAAGCGAACAAGAGTCTGGTTAGGGACTTTTGACACTGCTGAAGAAGCTGCCATGGTTTATGACAAAGCAGCTATTAACTTAAGAGGTTGCAATGCTCTCACTAATTTCATCATGCCTCCTACAAGGGAAGACACACACAGGGATGCTATTTCTTTTGAGTATGGTTATGATGAATCTCAGGATAGTGTGACTGGTTTGGTTGAGAATGTGAGTGATTCAAGTAAAGAGTCTCATCTGCCTTCACCCACTTCTGTGTTGGGACTTGAACATGAGAAGTTTGAGTTAGAAGAAGTTTTTAAAACAGATGGTTTGGTTATAGAAGATCCAACTTTCGAAGATACTTTTTTAGATTCACAAGATTTCAATTTTGAAAGTCATTTTATCACTGAGACTAATGTAAAACAGTTTGATGACAGTCTGAGTGATATTTCCCATTTTCTCAATGAGAATTTTCAATCGTGCAACTGGGATATAGATAGTTATTTCAACAATCTTTCTCCGTGTTCACGAAGTCCACGAAGCGAAGTTTTAGAGTGA 855 0.3918 METILSEEKVVTYMHVKHGILNQTPKVVRISTMDPYATDDEDEGLVNLPKIKKIVNEIRIVEKKPSTTVSMNQLYKEKTEERGRRKLRGVRQRPWGRWAAEIRDPVKRTRVWLGTFDTAEEAAMVYDKAAINLRGCNALTNFIMPPTREDTHRDAISFEYGYDESQDSVTGLVENVSDSSKESHLPSPTSVLGLEHEKFELEEVFKTDGLVIEDPTFEDTFLDSQDFNFESHFITETNVKQFDDSLSDISHFLNENFQSCNWDIDSYFNNLSPCSRSPRSEVLE* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01572 284 FunFam Ethylene-responsive transcription factor 2 86 144 - -
Phac6g01572 284 SMART rav1_2 86 149 IPR001471 GO:0003700|GO:0006355
Phac6g01572 284 PRINTS Ethylene responsive element binding protein signature 87 98 IPR001471 GO:0003700|GO:0006355
Phac6g01572 284 PRINTS Ethylene responsive element binding protein signature 109 125 IPR001471 GO:0003700|GO:0006355
Phac6g01572 284 SUPERFAMILY DNA-binding domain 86 143 IPR016177 GO:0003677
Phac6g01572 284 ProSiteProfiles AP2/ERF domain profile. 86 143 IPR001471 GO:0003700|GO:0006355
Phac6g01572 284 CDD AP2 86 142 IPR001471 GO:0003700|GO:0006355
Phac6g01572 284 Pfam AP2 domain 86 135 IPR001471 GO:0003700|GO:0006355
Phac6g01572 284 Gene3D AP2/ERF domain 86 144 IPR036955 GO:0003700|GO:0006355
Phac6g01572 284 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 24 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01572 Phac-Chr6 17510538 17511562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01572 12 264 AP2-EREBP Transcription Factor Family AT3G61630 35.390 1.04e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac6g01572 AP2 1.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01572 - - vum:124824749 339.347