Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01563 ATGGGAAACAATGAGGAAGAGAAATCTACCAAGACTGAAAAGCCTTCTTCACCTGTAACAATGGATCAGGCCAATCAGACCAACCAGCCCAATATTCATGTATATCCTGATTGGGCAGCCATGCAGGCATATTATGGGCCAAGAGTCACCATGCCACCATACTACAACTCGGCTGTGGCTTCTGGTCACGCTCCTCACCCATACATGTGGGGTCCACCACAGCCTATGATGCCACCTTATGGGCCTCCGTATGCAGCAATTTATTCACATGGAGGGGTTTACCCTGCAGTTCCAATCGGGCCACATACACATAGTCAAGGAATTCCATCTTCACCGGCTGCTGGGACTCCTTTAAGCATGGAGACACCACTCAAATCATCAGGAAATACTGATCAGGGTTTAATGAAGAAATTGAAGGAGTTTGATGGACTTGCAATGTCAATAGGAAATGGCCATAATGAAAGTGTAGAGCGTGGAGGTGAAAACAGGCTGTCACAGAGTGTGGATACTGAGGGTTCCAGTGATGGAAGTGATGGCAGCACTTCAGGGGCTAATCAAACAAGAAGGAAAAGAAGCCGTGAGGGAACACCAACCACTGATGGAGAAGGGAAAACTGAGATACAAAGCAGTCCCATTTCCAAAGATACTGCAGCTTCTAATAAGATCGTGGCAGTTGCCCCTGCCAGTGTTGCAGGAACAATAGTTGGACCTGTAGTTTCTTCAGGTATGACCACCGTGCTGGAGCTGAGAAATCCTTCCAGTGTTCATTCTAAAGCAAATACCACAAGTGCCCCACAACCTTCTGTATTACCTGCAGAAGCTTGGTTACAGAATGAGCGTGAGCTGAAACGAGAGAGGCGTAAACAATCTAACAGAGAATCTGCTAGAAGGTCCAGACTAAGGAAGCAGGCTGAAACTGAAGAACTGGCACGAAAAGTTGAATCCTTGAATACTGAGAATGAGACACTGAAATCAGAAATAAATCGACTGACTGAAAGTTCTGAGAAAATGAGGGTGGAAAATGCAACATTGAGGGATGGATCCAAGAGGAGGCAAACGTGTCAACCACTTTTTTTAGAAACACCAAAAGAAAGTTTGTTGAAAGAAAGGAAAAAGTGGGGAGGAACAAAGAAAGTGAATATGTTGGCTAGTGAAGAAATAAACAAAAAACTGTTTCCAGACAAAGTTTGCCCCAATAATCAACTTGTGCACTACAAACGCACCTCACCACTTCTAATTTCCTGA 1245 0.4474 MGNNEEEKSTKTEKPSSPVTMDQANQTNQPNIHVYPDWAAMQAYYGPRVTMPPYYNSAVASGHAPHPYMWGPPQPMMPPYGPPYAAIYSHGGVYPAVPIGPHTHSQGIPSSPAAGTPLSMETPLKSSGNTDQGLMKKLKEFDGLAMSIGNGHNESVERGGENRLSQSVDTEGSSDGSDGSTSGANQTRRKRSREGTPTTDGEGKTEIQSSPISKDTAASNKIVAVAPASVAGTIVGPVVSSGMTTVLELRNPSSVHSKANTTSAPQPSVLPAEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLNTENETLKSEINRLTESSEKMRVENATLRDGSKRRQTCQPLFLETPKESLLKERKKWGGTKKVNMLASEEINKKLFPDKVCPNNQLVHYKRTSPLLIS* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01563 414 Pfam Disordered region downstream of MFMR 131 259 - -
Phac6g01563 414 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 351 IPR044827 GO:0003700|GO:0006355|GO:0043565
Phac6g01563 414 MobiDBLite consensus disorder prediction 104 132 - -
Phac6g01563 414 Pfam bZIP transcription factor 279 341 IPR004827 GO:0003700|GO:0006355
Phac6g01563 414 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 281 344 IPR004827 GO:0003700|GO:0006355
Phac6g01563 414 MobiDBLite consensus disorder prediction 253 306 - -
Phac6g01563 414 MobiDBLite consensus disorder prediction 14 33 - -
Phac6g01563 414 SUPERFAMILY Leucine zipper domain 282 337 IPR046347 GO:0003700|GO:0006355
Phac6g01563 414 Coils Coil 272 292 - -
Phac6g01563 414 CDD bZIP_plant_GBF1 284 332 IPR045314 GO:0003700|GO:0006355
Phac6g01563 414 SMART brlzneu 279 343 IPR004827 GO:0003700|GO:0006355
Phac6g01563 414 MobiDBLite consensus disorder prediction 277 306 - -
Phac6g01563 414 FunFam G-box binding factor 3 282 337 - -
Phac6g01563 414 MobiDBLite consensus disorder prediction 1 33 - -
Phac6g01563 414 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 286 301 IPR004827 GO:0003700|GO:0006355
Phac6g01563 414 Gene3D - 282 338 - -
Phac6g01563 414 MobiDBLite consensus disorder prediction 160 186 - -
Phac6g01563 414 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Phac6g01563 414 MobiDBLite consensus disorder prediction 146 216 - -
Phac6g01563 414 MobiDBLite consensus disorder prediction 253 268 - -
Phac6g01563 414 Coils Coil 299 340 - -
Phac6g01563 414 MobiDBLite consensus disorder prediction 102 132 - -
Phac6g01563 414 MobiDBLite consensus disorder prediction 201 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01563 Phac-Chr6 17464984 17472027 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01563 1 346 bZIP Transcription Factor Family AT2G46270 51.412 9.82e-103 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac6g01563 MFMR_assoc 1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01563 K09060 - gmx:778133 581.252