Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01543 ATGAATTGTTTTCCGTGTTTTTCAAAGACTAAGAAATGCAATAGCAAGAGGGAGCAGCTAGGGCTTTCAACACAAGAAACTGTTATAGCAACAAGAACACCTCAGGATGTAAAGAAACAAAAGGCAGATGATCCAAATGTTGACACTTCAAATATTCAAGCACAAAATTTCACGTTCCGCGAGCTAGCAATTGCAACAAAGAATTTTCGGCAAGAATGCTTGATGGGTGAAGGGGGCTTTGGCAGAGTTTACAAGGGAACAATTCCTGCAACCGGGCAGGTGGTAGCAGTGAAACAACTCGATCGAAATGGAGGGCAAGGAAGTAAGGATTTTCTAGTTGAGGTTTTGATGTTAAGCCTCTTAAACCATGAAAACCTCGTCAAACTCACTGGTTATTGTGCTGATGGAGATCAACGTCTTTTGGTGTATGAGTTCATGGGAGGTGGCTCTTTAGAAGGCCTTCTTCTTGGGAGGAAATCAGATGAACCTCCATTAGATTGGTATAGCAGAATGAAAATAGCATCACATGCCGCGAAAGGACTATGGTACTTGCACGATAAGGCCAACCCTGCAATCATATATCGGGACTTGAAATCTTCGAACATCTTGCTGGATGATGATTTCAATGCAAAACTATCAGATTATGGATTGGCCAAACTTGCTGGCAAAGATAAGATGAACATTGTCCCCACAAGAGTAATGGGCACTTATGGTTACAGTGCTCCTGAGTACGTAAGAACAGGTAACCTCACCTTGAAATCAGATGTCTACAGTTTTGGAGTTGTCCTGCTAGAGCTCATTACTGGACGACGTGCGGTTGACACCACAAGAACACACGATGAGCAAAATCTAGTTTCATGGGCACAACCCATATTTAGGGATCCAAAGAGATATCCAGATATGGCAGATCCAAATTTGAACAAAGATTTCCCAGAAAAGGATCTTAACCAAGCTGTTGCAATTGCAGCCATGTGCTTGCAGGAGGAAGCAGCAGCTCGTCCTTTGATGAGTGATGTTGTAACTGCTCTCAGTTTTCTTTCCACCGCTACTCCAGAGGGTGAGGGTGAAGGTGATGCCGCTGAAAATGACTGTTGTAGCTCCTCCGGTGAAGATAGTTCTTCTAGCGAAGACAATGGAACTGCTAAAAACCAGGTTAGTGCAAAATACCAAGAAAGTGAAGACGCCTCAGAATCTGAGTATGATTATTATGAGAATGAAAACCAACATAATTACAGTCCTCAAGACACTGAAGAGACCAAGGAGTTCCACTCCAAATCGAGACGCAAGAGCAGCACCAAATCAAAGAATGGAACCGCTTCCTCTAGCCAAAGAAGCAGCTCCAATTCAGATTCAGAACATGGACGTGTCTCAATCGGCCGCAAAAGCAGTAGGAAAAGTAGGAAAGAGAAATCTTCATTAAACCAGAGGAGCAGTAAAAAATCTTCTTTGAAGCATAAGAGCAACAAGAAATCTTCTGTCAAAGTATTAAGCAACAAGAAAAGCCATTCATCCAATTCAAGTAGCAGTGGAACGTTACAACATGATGGTGTTGATGTTATTGACCGTAGCGGAAGCCGGCCATCAGAAGGGAACATTTCAATTGGCCTAATTAGTAGTGAGAGTGTTCACTCAGACAATGACAGCAGCATAAGGTCCCAGGAAAGGAGCAGCATGCATTTAGATTATACCAAAAGCGAGGAATCATAA 1707 0.4271 MNCFPCFSKTKKCNSKREQLGLSTQETVIATRTPQDVKKQKADDPNVDTSNIQAQNFTFRELAIATKNFRQECLMGEGGFGRVYKGTIPATGQVVAVKQLDRNGGQGSKDFLVEVLMLSLLNHENLVKLTGYCADGDQRLLVYEFMGGGSLEGLLLGRKSDEPPLDWYSRMKIASHAAKGLWYLHDKANPAIIYRDLKSSNILLDDDFNAKLSDYGLAKLAGKDKMNIVPTRVMGTYGYSAPEYVRTGNLTLKSDVYSFGVVLLELITGRRAVDTTRTHDEQNLVSWAQPIFRDPKRYPDMADPNLNKDFPEKDLNQAVAIAAMCLQEEAAARPLMSDVVTALSFLSTATPEGEGEGDAAENDCCSSSGEDSSSSEDNGTAKNQVSAKYQESEDASESEYDYYENENQHNYSPQDTEETKEFHSKSRRKSSTKSKNGTASSSQRSSSNSDSEHGRVSIGRKSSRKSRKEKSSLNQRSSKKSSLKHKSNKKSSVKVLSNKKSHSSNSSSSGTLQHDGVDVIDRSGSRPSEGNISIGLISSESVHSDNDSSIRSQERSSMHLDYTKSEES* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01543 568 MobiDBLite consensus disorder prediction 497 514 - -
Phac6g01543 568 Gene3D Phosphorylase Kinase; domain 1 29 145 - -
Phac6g01543 568 MobiDBLite consensus disorder prediction 411 425 - -
Phac6g01543 568 SMART serkin_6 69 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01543 568 SUPERFAMILY Protein kinase-like (PK-like) 46 346 IPR011009 -
Phac6g01543 568 MobiDBLite consensus disorder prediction 526 546 - -
Phac6g01543 568 MobiDBLite consensus disorder prediction 433 453 - -
Phac6g01543 568 Pfam Protein kinase domain 71 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01543 568 MobiDBLite consensus disorder prediction 547 568 - -
Phac6g01543 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Phac6g01543 568 MobiDBLite consensus disorder prediction 350 568 - -
Phac6g01543 568 Gene3D Transferase(Phosphotransferase) domain 1 146 362 - -
Phac6g01543 568 PANTHER OS07G0668900 PROTEIN 3 352 - -
Phac6g01543 568 ProSiteProfiles Protein kinase domain profile. 69 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01543 568 MobiDBLite consensus disorder prediction 365 391 - -
Phac6g01543 568 FunFam probable serine/threonine-protein kinase RLCKVII 40 145 - -
Phac6g01543 568 CDD STKc_IRAK 75 343 - -
Phac6g01543 568 MobiDBLite consensus disorder prediction 479 496 - -
Phac6g01543 568 FunFam Serine/threonine-protein kinase PBS1 146 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01543 Phac-Chr6 17388781 17392033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01543 1 353 Glycoside Hydrolase AT3G07070 64.384 1.76e-163 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Phac6g01543 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01543 - - gmx:100807682 780.015