Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01542 ATGAAAACGAAAGTCCACTTACCTCGCTACCTTTTGTTTGCACTTCTATTTCTTGCACCATTCCCACACTCCTCCCCACTCCTTTCGCCTACTGCATTCTCTCTTCCACAAGGTTCATGTGTGCTGAAGTTCAACACAAGCCAATATGTGGCATTTGATGAGTGCATCGGTGTTAAAGAGAATATTTACATGTGGGGTGAGGATGGGTTCCCGACCACGTTGTGCTGTCGAAATGCTCTCACGATTTTGTCCAATGCGTTGGCTTCACAAGCACTGAACTCGGGAGGAAGAGTGTTCCTTTCCCAAGATCAATGGCAGAGTTGTTCGCAGTCATTTCACCCGCAACAAGGGATGTCACTTGATTCATGTGGCTTTGACAGCTTCTACCGAGGCAGTTCCATATGCTCCGACTTGATTTTGCAGGATGTTAGGACCCTGCAACAGTACCCAGACACATTGAGCCGGTGCTCCCACTTCAACCAACGTTTTGATCAATCTTGTGCAGATTGTACCAGTGGAATATTGAGCGTGAGAGATACTTTATATTCTCAATTTGCCAAAAACAACAACGACACTGACAGAGCCATATGTGGGGTGGCAGCTATTATTGCTCTTGCAGCTGGCAGACCAAACGATCCTCTCGTTGATAAATTTTTACGATGCTTGCCACCTTCAGCCTCAGGATCAGACAAGAGATCTCTGTGGAAAGCCTTGCTGAGTGTGCCAGTAGTTGTGATTGTAATATTGCTTGTGGTTATTATGGTCAAATGTTTGTCCAAGAAGAAGGGTCGTAGACAGGTTGACTTGAAAGAGATCACTGCATGGTCTGGATTGTACTGGTTCTGCAAAAGGGAAATTGAGAATGCCATGAATTATGGTGGTCGAAAGATAAGCCTTGGACGTGGAAGTGCAGGGCAGGTATATAGAGGCGTTCTACCCAGTGGTCAAATCGTGGCAATCAAGCATTTAACAAAGAGTAACACCTCTGAGTCTTTCACGCGAGAAGTTGAAGGCCTTTCAAGGCTTCGCCATCCAAACTTGGTTTGCCTCTTTGGGTGCTGCATTGAAGGGGATGAGAGATATTTAGTCTATGAATTTTGTGCAAACGGGAATCTTGCTCAACATCTCTTAAGAAGAGATAGTCACTTGAGTTGGGAAACAAGAGTGAGAATTTTGAGAGATTGTTCATTTGCACTCAAGTACCTCCACCATCATATGGAAGGCTGTGTTGTCCATAGAGATATAAAGCTTACGAACATTCTTTTGACTGAGAAATACCAAGCCAAACTGTCAGATTTTGGACTGTCAAAGGTGATGGGAATCAAAGAGAGCAAGGTTTTTACCGATGTAAGAGGAACCATAGGCTACATGGATCCAGAATACATGAGTAATGCCAAGCTAACATGTGCCAGTGATGTATACAGTTTTGGTATTGTTGCTTTGCAAATATTGTCTGGACAGAAAGTCATAGAGTTGGATCTTGATGCCAGAGATCAGCTCACTAGGAAGGCAAGAGATGTGAGTATGGGAAAGCGTCCATTGTCTGATTTTGAAGACCCAAGGCTAAAAGGAAAGGTTGATAAGGCAGACTTTGAAGCCATCCTACAAATTGCAGTGTTGTGTGTTGCAAAATCAAGCAAAGGTCGCCCTACCATTGAGGTTGTTTTTGAAGAATTGGACAAGGTCTGCATGGACACAGAAACCAAGATGAAGACAAAGAAGGATGAGAGCTCATCAACAACATCCACCCCCAGCTCCAAATCCTCCAGATCAGCTCATCTTTGA 1785 0.4415 MKTKVHLPRYLLFALLFLAPFPHSSPLLSPTAFSLPQGSCVLKFNTSQYVAFDECIGVKENIYMWGEDGFPTTLCCRNALTILSNALASQALNSGGRVFLSQDQWQSCSQSFHPQQGMSLDSCGFDSFYRGSSICSDLILQDVRTLQQYPDTLSRCSHFNQRFDQSCADCTSGILSVRDTLYSQFAKNNNDTDRAICGVAAIIALAAGRPNDPLVDKFLRCLPPSASGSDKRSLWKALLSVPVVVIVILLVVIMVKCLSKKKGRRQVDLKEITAWSGLYWFCKREIENAMNYGGRKISLGRGSAGQVYRGVLPSGQIVAIKHLTKSNTSESFTREVEGLSRLRHPNLVCLFGCCIEGDERYLVYEFCANGNLAQHLLRRDSHLSWETRVRILRDCSFALKYLHHHMEGCVVHRDIKLTNILLTEKYQAKLSDFGLSKVMGIKESKVFTDVRGTIGYMDPEYMSNAKLTCASDVYSFGIVALQILSGQKVIELDLDARDQLTRKARDVSMGKRPLSDFEDPRLKGKVDKADFEAILQIAVLCVAKSSKGRPTIEVVFEELDKVCMDTETKMKTKKDESSSTTSTPSSKSSRSAHL* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01542 594 MobiDBLite consensus disorder prediction 577 594 - -
Phac6g01542 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
Phac6g01542 594 MobiDBLite consensus disorder prediction 567 594 - -
Phac6g01542 594 FunFam probable receptor-like protein kinase At5g59700 367 578 - -
Phac6g01542 594 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 101 588 - -
Phac6g01542 594 SMART serkin_6 293 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01542 594 Pfam Protein kinase domain 298 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01542 594 Gene3D Phosphorylase Kinase; domain 1 254 366 - -
Phac6g01542 594 Pfam SPARK 36 193 IPR043891 -
Phac6g01542 594 ProSiteProfiles Protein kinase domain profile. 293 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01542 594 SUPERFAMILY Protein kinase-like (PK-like) 279 559 IPR011009 -
Phac6g01542 594 Gene3D Transferase(Phosphotransferase) domain 1 367 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01542 Phac-Chr6 17382358 17386831 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01542 299 582 Receptor kinase-like Gene Family AT1G51800 41.581 3.12e-56 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Phac6g01542 Pkinase 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01542 - - vum:124837890 938.717