Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01530 ATGGAGTCAAATAAGCAGTGGAAGGAAGGAGGGTGTTCAAGGTCAAGAATTTCAGCACTGGTTGTGGATGACGATGCTATGATTCGGAAAATCCACAAGACGATGTTGGAGCGGTTATTTAACATGGACGCGAAAACGGTTAGTGATGGAAAGGAAGCAGTGGATCTGCATCGATGTGGGGTGAATTTTGACATAATTTTCATGGACAAAGAAATGCCCATCATGGATGGTCATGAGGCCACAAAAGAGCTACGTGGTATGGGTGTTAAGAGCTTGATTGTGGGAATTACTACGCGTGCTGATGGGAAAGATACAGAAGAATTTTTAGGTGCAGGATCCAACTATTGCTTTGAAAAACCTCTTGATCGAACAAAGGTTGAACAAATCTTGCAAGACCATCCAAATTTTACAACTTGA 417 0.4221 MESNKQWKEGGCSRSRISALVVDDDAMIRKIHKTMLERLFNMDAKTVSDGKEAVDLHRCGVNFDIIFMDKEMPIMDGHEATKELRGMGVKSLIVGITTRADGKDTEEFLGAGSNYCFEKPLDRTKVEQILQDHPNFTT* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01530 138 ProSiteProfiles Response regulatory domain profile. 18 134 IPR001789 GO:0000160
Phac6g01530 138 Gene3D - 2 135 - -
Phac6g01530 138 SMART REC_2 17 130 IPR001789 GO:0000160
Phac6g01530 138 Pfam Response regulator receiver domain 20 130 IPR001789 GO:0000160
Phac6g01530 138 SUPERFAMILY CheY-like 16 133 IPR011006 -
Phac6g01530 138 PANTHER TWO-COMPONENT RESPONSE REGULATOR 6 132 - -
Phac6g01530 138 CDD REC_hyHK_CKI1_RcsC-like 20 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01530 Phac-Chr6 17318774 17321996 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01530 17 126 Response Regulator Gene Family AT3G04280 45.536 3.27e-27 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac6g01530 Response_reg 8.1e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01530 - - pvu:PHAVU_006G107500g 256.914