Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01514 ATGGAACCTAATGACAACCAACTCACCTCCTTCTTCCACCACCACCACCACCACCCCCACCCCCACCATCACCACCAGCCCCAGCCACCGCCGCAGACCGCTGCAACCACCACCGCCTCCCCGACTAACGGCCTCTTGCCCAACGCCGACGGGTCCCACATACTGTACCCTCACTCGGTGGCCTCGGCGGTGTCGTCGCAGCTGGAACCGGCCAAGAGGAAGCGGGGGCGGCCGAGGAAGTACGGCACGCCGGAGCAGGCTCTTGCCGCAAAGAAAGCCTCTACGGCGTCGTCTCATTCGTTCTCCGCGGACAAGAAGCCCAACTCCCTAACGTTCCCTTCTTCCTCATCTTTCACGTCCAAGAAATCCCATTCCTTCGCTCTAGGCAATGCAGGGCAGGGGTTCACTCCACATGTCATTGCCGTTGCTGCTGGTGAGGATGTTGGGCAGAAAATTATGTTATTCATGCAACAAAGTAGGCGTGAAATGTGTATTCTGTCTGCATCTGGTTCCATCTCTAATGCCTCTCTTCGCCAGCCAGCAACCTCAGGAGGCAACATTACATATGAGGGTCGGTTTGAGATTATTTCACTTACTGGTTCTTACGTCCGTAATGAACTTGGAACTCGAACTGGTGGTCTAAGTGTATGTTTATCGAACACTGATGGACAAATCATAGGTGGTGGAGTTGGTGGACCGCTTAAAGCAGCTGGTCCAGTTCAGGTAATTTCAGAAAGAACTTTTTGGTGGGAAATATGA 759 0.5375 MEPNDNQLTSFFHHHHHHPHPHHHHQPQPPPQTAATTTASPTNGLLPNADGSHILYPHSVASAVSSQLEPAKRKRGRPRKYGTPEQALAAKKASTASSHSFSADKKPNSLTFPSSSSFTSKKSHSFALGNAGQGFTPHVIAVAAGEDVGQKIMLFMQQSRREMCILSASGSISNASLRQPATSGGNITYEGRFEIISLTGSYVRNELGTRTGGLSVCLSNTDGQIIGGGVGGPLKAAGPVQVISERTFWWEI* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01514 252 SUPERFAMILY AF0104/ALDC/Ptd012-like 133 243 - -
Phac6g01514 252 CDD DUF296 136 222 IPR005175 -
Phac6g01514 252 MobiDBLite consensus disorder prediction 1 116 - -
Phac6g01514 252 Pfam Plants and Prokaryotes Conserved (PCC) domain 137 243 IPR005175 -
Phac6g01514 252 ProSiteProfiles PPC domain profile profile. 131 252 IPR005175 -
Phac6g01514 252 Gene3D - 137 247 - -
Phac6g01514 252 MobiDBLite consensus disorder prediction 29 47 - -
Phac6g01514 252 MobiDBLite consensus disorder prediction 90 116 - -
Phac6g01514 252 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 20 243 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01514 Phac-Chr6 17191632 17199358 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01514 33 243 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 56.388 6.32e-66 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01514 - - gmx:100809675 356.295