Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01513 ATGGAACCTAATGACAACCAACTCACCTCCTTCTTCCACCACCACCACCACCACCCCCACCCCCACCATCACCACCAGCCCCAGCCACCGCCGCAGACCGCTGCAACCACCACCGCCTCCCCGACTAACGGCCTCTTGCCCAACGCCGACGGGTCCCACATACTGTACCCTCACTCGGTGGCCTCGGCGGTGTCGTCGCAGCTGGAACCGGCCAAGAGGAAGCGGGGGCGGCCGAGGAAGTACGGCACGCCGGAGCAGGCTCTTGCCGCAAAGAAAGCCTCTACGGCGTCGTCTCATTCGTTCTCCGCGGACAAGAAGCCCAACTCCCTAACGTTCCCTTCTTCCTCATCTTTCACGTCCAAGAAATCCCATTCCTTCGCTCTAGGCAATGCAGGGCAGGGGTTCACTCCACATGTCATTGCCGTTGCTGCTGGTGAGGATGTTGGGCAGAAAATTATGTTATTCATGCAACAAAGTAGGCGTGAAATGTGTATTCTGTCTGCATCTGGTTCCATCTCTAATGCCTCTCTTCGCCAGCCAGCAACCTCAGGAGGCAACATTACATATGAGGGTCGGTTTGAGATTATTTCACTTACTGGTTCTTACGTCCGTAATGAACTTGGAACTCGAACTGGTGGTCTAAGTGTATGTTTATCGAACACTGATGGACAAATCATAGGTGGTGGAGTTGGTGGACCGCTTAAAGCAGCTGGTCCAGTTCAGGTCATCGTTGGAACATTTTTTATTGACAACAAGAAGGATTCTAGTCCAAAAGTTGATGCCTCTGCCAGCAAGTTGCCACCACCACCAGTTGGTGAACCAGTATCAAGTTTAGGTTTCCGCCAATCAGTCGAGTCTCCTCCTGGTGGAAATCCAATACGTGGAAATGATGAGCATCAAGCTATGGGGGGAAGTCATTTCATGATTCAACAGCTTGGTTTGCAGGGTACGCCTCCCCGGTCCACAGACTGGGCTCGTCGAGATTCAAGAAATAGCAGTTTTGAGCTGACAGGAAGGACAGGTCATGGGACGCACCAGTCTCCTGAGAATGGGGGCTATGAGCAAATTCCCGATTGA 1077 0.5283 MEPNDNQLTSFFHHHHHHPHPHHHHQPQPPPQTAATTTASPTNGLLPNADGSHILYPHSVASAVSSQLEPAKRKRGRPRKYGTPEQALAAKKASTASSHSFSADKKPNSLTFPSSSSFTSKKSHSFALGNAGQGFTPHVIAVAAGEDVGQKIMLFMQQSRREMCILSASGSISNASLRQPATSGGNITYEGRFEIISLTGSYVRNELGTRTGGLSVCLSNTDGQIIGGGVGGPLKAAGPVQVIVGTFFIDNKKDSSPKVDASASKLPPPPVGEPVSSLGFRQSVESPPGGNPIRGNDEHQAMGGSHFMIQQLGLQGTPPRSTDWARRDSRNSSFELTGRTGHGTHQSPENGGYEQIPD* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01513 358 MobiDBLite consensus disorder prediction 1 116 - -
Phac6g01513 358 MobiDBLite consensus disorder prediction 334 351 - -
Phac6g01513 358 CDD DUF296 136 247 IPR005175 -
Phac6g01513 358 SUPERFAMILY AF0104/ALDC/Ptd012-like 133 247 - -
Phac6g01513 358 MobiDBLite consensus disorder prediction 254 300 - -
Phac6g01513 358 Gene3D - 137 262 - -
Phac6g01513 358 ProSiteProfiles PPC domain profile profile. 131 269 IPR005175 -
Phac6g01513 358 MobiDBLite consensus disorder prediction 29 47 - -
Phac6g01513 358 MobiDBLite consensus disorder prediction 312 358 - -
Phac6g01513 358 MobiDBLite consensus disorder prediction 90 116 - -
Phac6g01513 358 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 20 285 IPR039605 GO:0003680
Phac6g01513 358 Pfam Plants and Prokaryotes Conserved (PCC) domain 137 247 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01513 Phac-Chr6 17191632 17199758 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01513 33 358 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 50.137 5.12e-85 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01513 - - gmx:100809675 543.888