Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01512 ATGGAACCTAATGACAACCAACTCACCTCCTTCTTCCACCACCACCACCACCACCCCCACCCCCACCATCACCACCAGCCCCAGCCACCGCCGCAGACCGCTGCAACCACCACCGCCTCCCCGACTAACGGCCTCTTGCCCAACGCCGACGGGTCCCACATACTGTACCCTCACTCGGTGGCCTCGGCGGTGTCGTCGCAGCTGGAACCGGCCAAGAGGAAGCGGGGGCGGCCGAGGAAGTACGGCACGCCGGAGCAGGCTCTTGCCGCAAAGAAAGCCTCTACGGCGTCGTCTCATTCGTTCTCCGCGGACAAGAAGCCCAACTCCCTAACGTTCCCTTCTTCCTCATCTTTCACGTCCAAGAAATCCCATTCCTTCGCTCTAGGCAATGCAGGGCAGGGGTTCACTCCACATGTCATTGCCGTTGCTGCTGGTGAGGATGTTGGGCAGAAAATTATGTTATTCATGCAACAAAGTAGGCGTGAAATGTGTATTCTGTCTGCATCTGGTTCCATCTCTAATGCCTCTCTTCGCCAGCCAGCAACCTCAGGAGGCAACATTACATATGAGGGTCGGTTTGAGATTATTTCACTTACTGGTTCTTACGTCCGTAATGAACTTGGAACTCGAACTGGTGGTCTAAGTGTATGTTTATCGAACACTGATGGACAAATCATAGGTGGTGGAGTTGGTGGACCGCTTAAAGCAGCTGGTCCAGTTCAGGTCATCGTTGGAACATTTTTTATTGACAACAAGAAGGATTCTAGTCCAAAAGTTGATGCCTCTGCCAGCAAGTTGCCACCACCACCAGTTGGTGAACCAGTATCAAGTTTAGGTTTCCGCCAATCAGTCGAGTCTCCTCCTGGTGGAAATCCAATACGTGGAAATGATGAGCATCAAGCTATGGGGGGAAGTCATTTCATGATTCAACAGCTTGGTTTGCAGGGTACGCCTCCCCGGTCCACAGACTGGGCTCGTCGAGATTCAAGAAATAGCAGTTTTGAGCTGACAGGTTTCCTATCTGCAGGAAGGACAGGTCATGGGACGCACCAGTCTCCTGAGAATGGGGGCTATGAGCAAATTCCCGATTGA 1092 0.5275 MEPNDNQLTSFFHHHHHHPHPHHHHQPQPPPQTAATTTASPTNGLLPNADGSHILYPHSVASAVSSQLEPAKRKRGRPRKYGTPEQALAAKKASTASSHSFSADKKPNSLTFPSSSSFTSKKSHSFALGNAGQGFTPHVIAVAAGEDVGQKIMLFMQQSRREMCILSASGSISNASLRQPATSGGNITYEGRFEIISLTGSYVRNELGTRTGGLSVCLSNTDGQIIGGGVGGPLKAAGPVQVIVGTFFIDNKKDSSPKVDASASKLPPPPVGEPVSSLGFRQSVESPPGGNPIRGNDEHQAMGGSHFMIQQLGLQGTPPRSTDWARRDSRNSSFELTGFLSAGRTGHGTHQSPENGGYEQIPD* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01512 363 Pfam Plants and Prokaryotes Conserved (PCC) domain 137 247 IPR005175 -
Phac6g01512 363 MobiDBLite consensus disorder prediction 314 363 - -
Phac6g01512 363 MobiDBLite consensus disorder prediction 331 356 - -
Phac6g01512 363 MobiDBLite consensus disorder prediction 1 116 - -
Phac6g01512 363 CDD DUF296 136 247 IPR005175 -
Phac6g01512 363 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 20 276 IPR039605 GO:0003680
Phac6g01512 363 SUPERFAMILY AF0104/ALDC/Ptd012-like 133 247 - -
Phac6g01512 363 MobiDBLite consensus disorder prediction 254 300 - -
Phac6g01512 363 ProSiteProfiles PPC domain profile profile. 131 269 IPR005175 -
Phac6g01512 363 MobiDBLite consensus disorder prediction 29 47 - -
Phac6g01512 363 MobiDBLite consensus disorder prediction 90 116 - -
Phac6g01512 363 Gene3D - 137 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01512 Phac-Chr6 17191632 17199358 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01512 33 363 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 50.000 1.76e-83 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01512 - - gmx:100809675 537.724