Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01509 ATGAACATGCCCACCATGCGCAGGCCTAGGGGTCGCCCTGTAGGCTCGAAGAACAAGCCCAAACCGGCACCACTCATGAGGCGAGACAACCACAACCTTATTGAAAGTCACGTGATCGAGATAGCAAGTGGAGCTGACATAACCAATAGCTTGGTCCAGTTTGCTCGAGGGAAAGAACGAGGTTTCTGTGTCCTGAGCGCCATCGGGAGCATCAGGAACGTGACTCTCCAGCAGTCGTTGATCCCTGACACCATTATGACACTGGAAGGTCAGTTGCAGATACTATCACTGAGAGGTTCATTTTTGCCCGGAGCAACACCGCCGACGCTGTCTGTTTATCTTGCCGGTGCTAAGGGACAAGTTGTCGGAGGCAACGTGGCGGGTCCGTTGGTGGCGTCAGGAACAGTTTATATCATTTTGGCTGCGTTTTCTAACGCTGCATTTGACACATTACCCGGAGAGGCTTTCTCCTCTAATCATCACCCTCATGACGATTCGTCTCCTTCAAATCTGCCATAG 519 0.5183 MNMPTMRRPRGRPVGSKNKPKPAPLMRRDNHNLIESHVIEIASGADITNSLVQFARGKERGFCVLSAIGSIRNVTLQQSLIPDTIMTLEGQLQILSLRGSFLPGATPPTLSVYLAGAKGQVVGGNVAGPLVASGTVYIILAAFSNAAFDTLPGEAFSSNHHPHDDSSPSNLP* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01509 172 Gene3D - 35 160 - -
Phac6g01509 172 ProSiteProfiles PPC domain profile profile. 31 164 IPR005175 -
Phac6g01509 172 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 5 155 IPR014476 GO:0003680
Phac6g01509 172 Pfam Plants and Prokaryotes Conserved (PCC) domain 36 145 IPR005175 -
Phac6g01509 172 CDD DUF296 37 143 IPR005175 -
Phac6g01509 172 MobiDBLite consensus disorder prediction 1 28 - -
Phac6g01509 172 SUPERFAMILY AF0104/ALDC/Ptd012-like 32 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01509 Phac-Chr6 17176176 17177050 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01509 7 172 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 50.847 4.14e-44 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01509 - - var:108344319 254.218