Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01487 ATGGGCTGCAAAAGAGGCATCTTGCGTGGACTTACAAAACTGATTCACTTGGGAGACTCGAGAGCTATGTCTTCATCTTCTCGTGTTCTTCCCACTCCCCTTGAAAACAAGTATATGAAACCCCCAGATTCTTGTCATCTTTCACCTGCCAGTGATCTGGCTGCGAATTCTGTCTCATCAAATTCAATCAGAAGTGCTGGGAATCCTGATGGCACCCTTTTTTCCTATGCTTCACAGCATGATAAGCAATATGAAGACCCCCCCTTTGTTCCTCAGACATTGGGTGACAATGTGTCTTCCGAAATACACTCAACAACATTCATTTCTCACCCTCATGAAAACGAAGATATTACCTGGGGACCAGATCCATTTCAGGATATTATTGGGTTTCCCGAAAATATTTCTGCCCAGCATGATCAGGTGGTAGAGAATGGCTGTTACATAAATGATGATAATGTCAAAAGAACCGATTTTGGGGAGTGGGTTGATCAGTTAATGTCAATTGATGATTCTCTTCACCCAAACTGGAGTCAGCTTCTTGGTGATGACAATGTAGCAGAACCAAAACCAAAGGTTCCTCAGCTGCTTGATATACCATCTGGAGAAGTTGTTGGCAATTCAGCAGCAACCACACCACAGACTAAGACTAGAATGCGTTGGACTCCAGAACTTCACGAGGCCTTTGTGGAAGCAGTCAATCAACTTGGTGGTAGTGAGAGGGCTACTCCGAAGGGTGTGTTGAATGTAATGAAAGTTGATGGCCTTACCATCTATCATGTAAAAAGCCACTTGCAGAAGTATAGAACTGCCAGATACAAACCAGAGCCATCAGAAGGAACGTCTGAGAAAAAGGCGACTCCAATAGAAGAAATGAAATCTCTAGACTTAAAAACGAGTAAAGGGATCACTGAAGCATTACGATTGCAGATGGAACTCCAGAAGCGACTTCACGAGCAACTTGAGATCCAAAGAAAGTTGCAGATTCAAATTGAAGACCAAGGAAAACGTCTTCAGATGATGTTTGAGAAACAAAGAGAGATGGGTGACAAGAAGGTTAATGGCTCCTCCGGTGAGGCTGCCACGGCCACCCCTGCCGCTCCATCAGACAGTGTGCTTCCTTCTTCTCCTCCAGTAGAAACCTCAAATGAGGGACGTGAGAAAAGCATGCAAGAAGAGAAGGAAGAAAGCACAAAGCAAAAGGCAAGGGAAGGTGAAGAAGTAATGAATGAAGATGAAGATGAAGTTGCACCAGCTACAAAGAGGGTGAAAAGTTCATAA 1278 0.4397 MGCKRGILRGLTKLIHLGDSRAMSSSSRVLPTPLENKYMKPPDSCHLSPASDLAANSVSSNSIRSAGNPDGTLFSYASQHDKQYEDPPFVPQTLGDNVSSEIHSTTFISHPHENEDITWGPDPFQDIIGFPENISAQHDQVVENGCYINDDNVKRTDFGEWVDQLMSIDDSLHPNWSQLLGDDNVAEPKPKVPQLLDIPSGEVVGNSAATTPQTKTRMRWTPELHEAFVEAVNQLGGSERATPKGVLNVMKVDGLTIYHVKSHLQKYRTARYKPEPSEGTSEKKATPIEEMKSLDLKTSKGITEALRLQMELQKRLHEQLEIQRKLQIQIEDQGKRLQMMFEKQREMGDKKVNGSSGEAATATPAAPSDSVLPSSPPVETSNEGREKSMQEEKEESTKQKAREGEEVMNEDEDEVAPATKRVKSS* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01487 425 FunFam Myb family transcription factor 214 272 - -
Phac6g01487 425 MobiDBLite consensus disorder prediction 384 406 - -
Phac6g01487 425 MobiDBLite consensus disorder prediction 269 292 - -
Phac6g01487 425 MobiDBLite consensus disorder prediction 356 383 - -
Phac6g01487 425 NCBIfam myb-like DNA-binding domain, SHAQKYF class 215 269 IPR006447 GO:0003677
Phac6g01487 425 Coils Coil 303 323 - -
Phac6g01487 425 Pfam Myb-like DNA-binding domain 217 268 IPR001005 -
Phac6g01487 425 SUPERFAMILY Homeodomain-like 213 269 IPR009057 -
Phac6g01487 425 MobiDBLite consensus disorder prediction 345 425 - -
Phac6g01487 425 Pfam MYB-CC type transfactor, LHEQLE motif 302 346 IPR025756 -
Phac6g01487 425 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 213 272 IPR017930 -
Phac6g01487 425 Gene3D - 214 273 - -
Phac6g01487 425 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 207 401 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01487 Phac-Chr6 17018945 17022458 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01487 101 423 G2-like Transcription Factor Family AT3G04450 46.243 7.52e-83 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac6g01487 Myb_DNA-binding 1.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01487 - - gmx:100803267 603.594