Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01485 ATGTTGAAATCAGGACTTACAAAACTGATTCACTTGGGAGACTCGAGAGCTATGTCTTCATCTTCTCGTGTTCTTCCCACTCCCCTTGAAAACAAGTATATGAAACCCCCAGATTCTTGTCATCTTTCACCTGCCAGTGATCTGGCTGCGAATTCTGTCTCATCAAATTCAATCAGAAGTGCTGGGAATCCTGATGGCACCCTTTTTTCCTATGCTTCACAGCATGATAAGCAATATGAAGACCCCCCCTTTGTTCCTCAGACATTGGGTGACAATGTGTCTTCCGAAATACACTCAACAACATTCATTTCTCACCCTCATGAAAACGAAGATATTACCTGGGGACCAGATCCATTTCAGGATATTATTGGGTTTCCCGAAAATATTTCTGCCCAGCATGATCAGGTGGTAGAGAATGGCTGTTACATAAATGATGATAATGTCAAAAGAACCGATTTTGGGGAGTGGGTTGATCAGTTAATGTCAATTGATGATTCTCTTCACCCAAACTGGAGTCAGCTTCTTGGTGATGACAATGTAGCAGAACCAAAACCAAAGGTTCCTCAGCTGCTTGATATACCATCTGGAGAAGTTGTTGGCAATTCAGCAGCAACCACACCACAGACTAAGACTAGAATGCGTTGGACTCCAGAACTTCACGAGGCCTTTGTGGAAGCAGTCAATCAACTTGGTGGTAGTGAGAGGGCTACTCCGAAGGGTGTGTTGAATGTAATGAAAGTTGATGGCCTTACCATCTATCATGTAAAAAGCCACTTGCAGAAGTATAGAACTGCCAGATACAAACCAGAGCCATCAGAAGGAACGTCTGAGAAAAAGGCGACTCCAATAGAAGAAATGAAATCTCTAGACTTAAAAACGAGTAAAGGGATCACTGAAGCATTACGATTGCAGATGGAACTCCAGAAGCGACTTCACGAGCAACTTGAGATCCAAAGAAAGTTGCAGATTCAAATTGAAGACCAAGGAAAACGTCTTCAGATGATGTTTGAGAAACAAAGAGAGATGGGTGACAAGAAGGTTAATGGCTCCTCCGGTGAGGCTGCCACGGCCACCCCTGCCGCTCCATCAGACAGTGTGCTTCCTTCTTCTCCTCCAGTAGAAACCTCAAATGAGGGACGTGAGAAAAGCATGCAAGAAGAGAAGGAAGAAAGCACAAAGCAAAAGGCAAGGGAAGGTGAAGAAGTAATGAATGAAGATGAAGATGAAGTTGCACCAGCTACAAAGAGGGTGAAAAGTTCATAA 1263 0.4363 MLKSGLTKLIHLGDSRAMSSSSRVLPTPLENKYMKPPDSCHLSPASDLAANSVSSNSIRSAGNPDGTLFSYASQHDKQYEDPPFVPQTLGDNVSSEIHSTTFISHPHENEDITWGPDPFQDIIGFPENISAQHDQVVENGCYINDDNVKRTDFGEWVDQLMSIDDSLHPNWSQLLGDDNVAEPKPKVPQLLDIPSGEVVGNSAATTPQTKTRMRWTPELHEAFVEAVNQLGGSERATPKGVLNVMKVDGLTIYHVKSHLQKYRTARYKPEPSEGTSEKKATPIEEMKSLDLKTSKGITEALRLQMELQKRLHEQLEIQRKLQIQIEDQGKRLQMMFEKQREMGDKKVNGSSGEAATATPAAPSDSVLPSSPPVETSNEGREKSMQEEKEESTKQKAREGEEVMNEDEDEVAPATKRVKSS* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01485 420 NCBIfam myb-like DNA-binding domain, SHAQKYF class 210 264 IPR006447 GO:0003677
Phac6g01485 420 Coils Coil 298 318 - -
Phac6g01485 420 SUPERFAMILY Homeodomain-like 208 264 IPR009057 -
Phac6g01485 420 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 202 396 IPR044848 GO:0003700
Phac6g01485 420 MobiDBLite consensus disorder prediction 264 287 - -
Phac6g01485 420 MobiDBLite consensus disorder prediction 340 420 - -
Phac6g01485 420 FunFam Myb family transcription factor 209 267 - -
Phac6g01485 420 Gene3D - 209 268 - -
Phac6g01485 420 Pfam Myb-like DNA-binding domain 212 263 IPR001005 -
Phac6g01485 420 MobiDBLite consensus disorder prediction 17 39 - -
Phac6g01485 420 MobiDBLite consensus disorder prediction 351 378 - -
Phac6g01485 420 MobiDBLite consensus disorder prediction 379 401 - -
Phac6g01485 420 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 208 267 IPR017930 -
Phac6g01485 420 Pfam MYB-CC type transfactor, LHEQLE motif 297 341 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01485 Phac-Chr6 17017978 17022458 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01485 96 418 G2-like Transcription Factor Family AT3G04450 46.243 5.86e-83 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac6g01485 Myb_DNA-binding 1.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01485 - - gmx:100803267 603.594