Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01483 ATGTCTTCATCTTCTCGTGTTCTTCCCACTCCCCTTGAAAACAAGTATATGAAACCCCCAGATTCTTGTCATCTTTCACCTGCCAGTGATCTGGCTGCGAATTCTGTCTCATCAAATTCAATCAGAAGTGCTGGGAATCCTGATGGCACCCTTTTTTCCTATGCTTCACAGCATGATAAGCAATATGAAGACCCCCCCTTTGTTCCTCAGACATTGGGTGACAATGTGTCTTCCGAAATACACTCAACAACATTCATTTCTCACCCTCATGAAAACGAAGATATTACCTGGGGACCAGATCCATTTCAGGATATTATTGGGTTTCCCGAAAATATTTCTGCCCAGCATGATCAGGTGGTAGAGAATGGCTGTTACATAAATGATGATAATGTCAAAAGAACCGATTTTGGGGAGTGGGTTGATCAGTTAATGTCAATTGATGATTCTCTTCACCCAAACTGGAGTCAGCTTCTTGGTGATGACAATGTAGCAGAACCAAAACCAAAGGTTCCTCAGCTGCTTGATATACCATCTGGAGAAGTTGTTGGCAATTCAGCAGCAACCACACCACAGACTAAGACTAGAATGCGTTGGACTCCAGAACTTCACGAGGCCTTTGTGGAAGCAGTCAATCAACTTGGTGGTAGTGAGAGGGCTACTCCGAAGGGTGTGTTGAATGTAATGAAAGTTGATGGCCTTACCATCTATCATGTAAAAAGCCACTTGCAGAAGTATAGAACTGCCAGATACAAACCAGAGCCATCAGAAGGAACGTCTGAGAAAAAGGCGACTCCAATAGAAGAAATGAAATCTCTAGACTTAAAAACGAGTAAAGGGATCACTGAAGCATTACGATTGCAGATGGAACTCCAGAAGCGACTTCACGAGCAACTTGAGATCCAAAGAAAGTTGCAGATTCAAATTGAAGACCAAGGAAAACGTCTTCAGATGATGTTTGAGAAACAAAGAGAGATGGGTGACAAGAAGGTTAATGGCTCCTCCGGTGAGGCTGCCACGGCCACCCCTGCCGCTCCATCAGACAGTGTGCTTCCTTCTTCTCCTCCAGTAGAAACCTCAAATGAGGGACGTGAGAAAAGCATGCAAGAAGAGAAGGAAGAAAGCACAAAGCAAAAGGCAAGGGAAGGTGAAGAAGTAATGAATGAAGATGAAGATGAAGTTGCACCAGCTACAAAGAGGGTGAAAAGTTCATAA 1212 0.4373 MSSSSRVLPTPLENKYMKPPDSCHLSPASDLAANSVSSNSIRSAGNPDGTLFSYASQHDKQYEDPPFVPQTLGDNVSSEIHSTTFISHPHENEDITWGPDPFQDIIGFPENISAQHDQVVENGCYINDDNVKRTDFGEWVDQLMSIDDSLHPNWSQLLGDDNVAEPKPKVPQLLDIPSGEVVGNSAATTPQTKTRMRWTPELHEAFVEAVNQLGGSERATPKGVLNVMKVDGLTIYHVKSHLQKYRTARYKPEPSEGTSEKKATPIEEMKSLDLKTSKGITEALRLQMELQKRLHEQLEIQRKLQIQIEDQGKRLQMMFEKQREMGDKKVNGSSGEAATATPAAPSDSVLPSSPPVETSNEGREKSMQEEKEESTKQKAREGEEVMNEDEDEVAPATKRVKSS* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01483 403 Gene3D - 192 251 - -
Phac6g01483 403 FunFam Myb family transcription factor 192 250 - -
Phac6g01483 403 SUPERFAMILY Homeodomain-like 191 247 IPR009057 -
Phac6g01483 403 MobiDBLite consensus disorder prediction 323 403 - -
Phac6g01483 403 MobiDBLite consensus disorder prediction 28 53 - -
Phac6g01483 403 MobiDBLite consensus disorder prediction 1 53 - -
Phac6g01483 403 MobiDBLite consensus disorder prediction 334 361 - -
Phac6g01483 403 MobiDBLite consensus disorder prediction 247 270 - -
Phac6g01483 403 NCBIfam myb-like DNA-binding domain, SHAQKYF class 193 247 IPR006447 GO:0003677
Phac6g01483 403 MobiDBLite consensus disorder prediction 362 384 - -
Phac6g01483 403 Pfam Myb-like DNA-binding domain 195 246 IPR001005 -
Phac6g01483 403 Pfam MYB-CC type transfactor, LHEQLE motif 280 324 IPR025756 -
Phac6g01483 403 Coils Coil 281 301 - -
Phac6g01483 403 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 191 250 IPR017930 -
Phac6g01483 403 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 185 380 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01483 Phac-Chr6 17017978 17022458 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01483 79 401 G2-like Transcription Factor Family AT3G04450 46.243 3.56e-83 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac6g01483 Myb_DNA-binding 1.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01483 - - gmx:100803267 603.594