Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01479 ATGTTAAGTCTAGAAGACAGAAAAATATCATCAAAGAACTTTGAGCGGAAAAATATTAAGCCATCTCAAACAATCACGGAAGATGTTAAGCCCAAAATCAGTTCACAAGCATCACATTCAACGTTCAGTGAGGTAGAAAAGATCTCTAATTTACCTCGTGGGGCAGCTAAAGATGGAGAATCTTACCCTGAGAAAGCTTCATCTGCAGGGCCCCGTGGCCAGTTCGAGAATAACACTGTGAAGCCAAGAGCTAAGAAACCCAAGTTACTCACTTCGACGAATCATAATGGAGATATTTGTGTTAAACCTCTGTCAACTCAGGATCAGGATTTGCACAGTAAAAATGTTGTACCCGCCTGCATCAGTAATATTACGATCGCTAGTTCTTCACGTCTTGAAGAAGTTAAAATGTCTTTGAATTGTGACTCAGCCTTGTCAGGACTAAACTTCAGTATTCCTGATTTGGACGTTGTTATGAAGTTTGTGGACAGGAAGTACCTTAGCTCTTGCAAAACTGTTGACCCTCCATTTTCTACGGCAAAGCTATTGAATGATCTTTGTAGTATTTTTCTCAAGTTGGGGCTTCGAAAGGGATCAAATTCCAACCAGGCCAATTCGCATTCACTACAATACGTTATTCAAGGAGAAAGGAAACCCTTTAATTTTATCAGTGACATAACAAAAGGTTCAGAAAAGGTGAAAATATCATTAATAGATGAATTTGGTAGTGACGCCTTGCCAAAGTTTAATTACATACCATACAATACAATATATCAAAGTGCTATTGTAAATATTTCTTTGGCCCGGATTTCGGATGAGGGTTGCTGTTCTGATTGTTCAGGCGACTGTCTTTCCTCATCATTGCCTTGTGCGTGTGCTCGGGAAACTGGTGGAGAGTTTGCTTACACTCCTCAAGGTTTGTTGAAAGAAGAATTTCTAAAAGCTTGCGTGACTATGAAGAATGAACCCCAAGAACATCATTATGTGTACTGTCAAGAGTGCCCTTTAGAGAAGTCCAAGAACGAGTACATGCCTGAACGATGCAAGGGGCATATGGTTAGGAAATTTATAAAGGAATGTTGGAGGAAATGCGGATGTCACATGCTTTGTGGGAATCGATTAGTGCAACGAGGTATTACATGCAAATTGCAGGTGTTCTTAACTCGACAAGGTAAAGGTTGGGGCCTTAGAACGTTAGAAGATTTGCCAAAAGGAACTTTTATATGTGAATATGTTGGAGAAATATTAACCAATATGGAGTTATACGATAGAATTATGGAAGAGAGTTGGAATGAAAGACATACATATCCTTTAACTCTTGATGCGGACTGGGGCTCAGAAAAGGGGTTAAAGGATGAGGAGGCACTATGTTTAGATGCAACATATAATGGAAATGTTGGAAGGTTCGTCAATCATAGATGCTATGATGCAAATCTCATAGACATTCCCGTTGAAATAGAGAGTCCGGATCACCATTATTATCATCTTGCCTTCTTTACCAACAAGAATGTGAGTGCGTATGAGGAATTGACATGGGATTATGGTATTGATTTTGATGATGAAGATCATCCTATTAAAGCATTCCGGTGTTCTTGTGGAAGCACCTTATGCCGTGATAAGAAACAAAAAGGGAAAGGAAAAATGAAAAAATCCTCTTCATGA 1662 0.3923 MLSLEDRKISSKNFERKNIKPSQTITEDVKPKISSQASHSTFSEVEKISNLPRGAAKDGESYPEKASSAGPRGQFENNTVKPRAKKPKLLTSTNHNGDICVKPLSTQDQDLHSKNVVPACISNITIASSSRLEEVKMSLNCDSALSGLNFSIPDLDVVMKFVDRKYLSSCKTVDPPFSTAKLLNDLCSIFLKLGLRKGSNSNQANSHSLQYVIQGERKPFNFISDITKGSEKVKISLIDEFGSDALPKFNYIPYNTIYQSAIVNISLARISDEGCCSDCSGDCLSSSLPCACARETGGEFAYTPQGLLKEEFLKACVTMKNEPQEHHYVYCQECPLEKSKNEYMPERCKGHMVRKFIKECWRKCGCHMLCGNRLVQRGITCKLQVFLTRQGKGWGLRTLEDLPKGTFICEYVGEILTNMELYDRIMEESWNERHTYPLTLDADWGSEKGLKDEEALCLDATYNGNVGRFVNHRCYDANLIDIPVEIESPDHHYYHLAFFTNKNVSAYEELTWDYGIDFDDEDHPIKAFRCSCGSTLCRDKKQKGKGKMKKSSS* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01479 553 CDD SET_SETDB-like 247 515 - -
Phac6g01479 553 Pfam SET domain 393 515 IPR001214 GO:0005515
Phac6g01479 553 ProSiteProfiles SET domain profile. 381 515 IPR001214 GO:0005515
Phac6g01479 553 MobiDBLite consensus disorder prediction 1 79 - -
Phac6g01479 553 MobiDBLite consensus disorder prediction 1 15 - -
Phac6g01479 553 Pfam Pre-SET motif 226 373 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Phac6g01479 553 ProSiteProfiles Pre-SET domain profile. 275 378 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Phac6g01479 553 FunFam SET-domain containing protein lysine methyltransferase family protein 226 540 - -
Phac6g01479 553 SUPERFAMILY SET domain 233 538 IPR046341 -
Phac6g01479 553 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 53 548 - -
Phac6g01479 553 Gene3D SET domain 226 540 IPR046341 -
Phac6g01479 553 SMART set_7 381 521 IPR001214 GO:0005515
Phac6g01479 553 SMART preset_2 223 365 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Phac6g01479 553 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 34 553 IPR025776 -
Phac6g01479 553 MobiDBLite consensus disorder prediction 16 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01479 Phac-Chr6 17002246 17008950 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01479 222 538 Su(var)3-9 homologs AT5G04940 29.080 1.01e-30 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phac6g01479 Pre-SET 1.3e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01479 - - vun:114188074 911.368