Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01435 ATGGAAAGGGTGTTGTCAGTAGATGAAATATCGGAGCAATATTGGGTGGCAGCGAAGAAGGAATCATGCAAGTTAAAGTCAAACATGAACCGTAGTGAATCGGAATGGGCCTTTCAGCAGTTTCTGCAGGAAGCAGCTTCTCCTTCTTCATCTTCTTCTTCTGATGTTAAGGATCCCGACATCAACATCAACATCCCTGTAACTCTAAATGTTAATTCCCAGGATTACCAAACTATTCTTAAGACCAAGCTTAACCTCGCCTGTGCTGCGGTCGCTTTGACTCGGGCAGTTCCTTCTGAAGTGGGATCGCAGGCTACCTTAAAAGATGCCAAAGCACCAAGTGGGATTCCTTGCTCACATTCCCTGCAAAAGAAGCCTGCTGTTGCAGTGAGGCCAACAATAAGTGGATCATCAAGAGAACAATCAGACGATGAGGAAGAGATTAGTATCACTGAAAACATGAATCCAACTGATGCAAAACGAGTAAGGAGGATGCTTTCTAATAGAGAGTCTGCCAGACGCTCAAGAAGAAGAAAACAGGCTCATTTATCTGACTTGGAGACACAGGTCTCCCAATTAAGAGGTGAAAATTCTTCTTTGTTAAAGCGCTTAACGGATGTGAGCCAGAGATACAACAGTGCTGCAGTTGACAACAGAGTTTTGAAAGCTGATGTTGAAACATTAAGAGCTAAGGTGAAGATGGCTGAAGAGACAGTGAAAAGAATTTCTGGTTTGAGCCCCATGTTTCATGCCATGACTGAGATGTCATCAATAGAAATACCATTGTTTGATGAAAGTCCTTCTGAGACATCAGCTGGTGCTGCTGTTCCTGTGCAAGAAGACCCAAATCATCAACTTTGTCAAGCCACTTCTAACAATGGGTTCGGAGGCATTTCTTCAATTAAAACTGTGCAGCAGAATGTTACGGCAGTGGTTGGTGGGAACAAAACTGGGGGAGCAACTTCCCTGCATAGAGTTGCTAGCTTGGAACATCTTCAGAAGCGGATTCGTGGTGATGAAGATTCACGCGGAGAGCAATAA 1041 0.44 MERVLSVDEISEQYWVAAKKESCKLKSNMNRSESEWAFQQFLQEAASPSSSSSSDVKDPDININIPVTLNVNSQDYQTILKTKLNLACAAVALTRAVPSEVGSQATLKDAKAPSGIPCSHSLQKKPAVAVRPTISGSSREQSDDEEEISITENMNPTDAKRVRRMLSNRESARRSRRRKQAHLSDLETQVSQLRGENSSLLKRLTDVSQRYNSAAVDNRVLKADVETLRAKVKMAEETVKRISGLSPMFHAMTEMSSIEIPLFDESPSETSAGAAVPVQEDPNHQLCQATSNNGFGGISSIKTVQQNVTAVVGGNKTGGATSLHRVASLEHLQKRIRGDEDSRGEQ* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01435 346 MobiDBLite consensus disorder prediction 101 149 - -
Phac6g01435 346 Coils Coil 169 203 - -
Phac6g01435 346 Coils Coil 218 238 - -
Phac6g01435 346 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 163 178 IPR004827 GO:0003700|GO:0006355
Phac6g01435 346 PANTHER BASIC LEUCINE ZIPPER 63 1 340 - -
Phac6g01435 346 SUPERFAMILY Leucine zipper domain 160 210 IPR046347 GO:0003700|GO:0006355
Phac6g01435 346 Pfam Basic leucine-zipper C terminal 227 339 IPR020983 -
Phac6g01435 346 Pfam bZIP transcription factor 159 210 IPR004827 GO:0003700|GO:0006355
Phac6g01435 346 CDD bZIP_plant_GBF1 161 212 IPR045314 GO:0003700|GO:0006355
Phac6g01435 346 MobiDBLite consensus disorder prediction 167 186 - -
Phac6g01435 346 SMART brlzneu 156 220 IPR004827 GO:0003700|GO:0006355
Phac6g01435 346 Gene3D - 159 214 - -
Phac6g01435 346 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 158 212 IPR004827 GO:0003700|GO:0006355
Phac6g01435 346 FunFam BZIP transcription factor 158 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01435 Phac-Chr6 16765432 16768722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01435 1 249 bZIP Transcription Factor Family AT4G02640 38.585 8.68e-42 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac6g01435 bZIP_C 1.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01435 K25784 - gmx:778137 464.922