Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01422 ATGGGAAAAGCCAGCAAATGGATCAGAAACTTCCTTCTAGGGAAAAAAGATGAGAAAATCAAGAAGATCGATGCATTCTGCTCCGAGGATCTTAAGAGTTCGGGAAGTCTGATTGTGAGTCCCAAAGTGAAGCGCAGATGGAGCTTTGGAAAACTAACAGGTGGAAGAATAACGAGCAAGATAGTAGGGCATAAATTATCCAGGTCTTTTGACTCAGGCGAGTCAGCGAAACTGCAAATACAAGCCTTGTCGGAAAGAAAGACTTCAAGGCGTCGTCTTCCAACACCATCGCCAAGGACTTACAAAGATAAAAACAAAGCTGCTACAAAGATTCAGGCTGGCTTTCGGTCATATTTGGCAAAGAGAGCATTGCATGCTTTAAGGGGATTAGTCAAGTTACAAGCACTAGTGAGGGGTCACCTTGTGAGGAAACAAACAACTGCTACCCTGCGTAGCATGCATGCGCTGATGGCCATACAAGTTAGAGCGCGAATTCACAGAATTCAAATGGCAGAGGAAGTAAACCTGCTTGGAAAACAGCCTCCACAACATAGAGAAGTTCCACAGTTCAGAGATCTCATAACAGAAGAAAATAAAGATTCAAAGGATATGACTGTGGAAGAAATGTTGGAGGTTTTGAGAAGCAGAAGTGGCCCTCTAGATGGCTATGTCAAGGCCAGAGAACGTGATTCCATGACATTCTATTCCAAGCATGTTCCGGTTGTTTCCAAACGAAAAATTCAATACAAGAATACTCAAATCGTAGAACCAAACAGCCCAGAAAACTTCCTGGTCATGTCTGAATTCAACACAACGGCAATGGCCACCTCATCAACTTCTCAGCGTCACTCAGTGCCTCACCGCCAATCACTGTCACCAAATTACATGAACAAGACAGAATCTTCAAGGGCTAAAGTAAGGTCGCAGAGTGAACCAAAACAACGACCCAAACGGGGAATGAGACACAAAGGCAAGTCTGTGGAATCCCCGTTGAATGGTCCAAGACAAAATCTGTTCTCAAACTCATTACGTTTCGATCGTGGAAGCCTGGATCATTGGGCTATAAATCTTCATGAGTCAATGAAGGACAGCAAGCGCGATTCCTTTGGCAGCAGCTCGATCACTACTGATTCCTATTATTGA 1143 0.4401 MGKASKWIRNFLLGKKDEKIKKIDAFCSEDLKSSGSLIVSPKVKRRWSFGKLTGGRITSKIVGHKLSRSFDSGESAKLQIQALSERKTSRRRLPTPSPRTYKDKNKAATKIQAGFRSYLAKRALHALRGLVKLQALVRGHLVRKQTTATLRSMHALMAIQVRARIHRIQMAEEVNLLGKQPPQHREVPQFRDLITEENKDSKDMTVEEMLEVLRSRSGPLDGYVKARERDSMTFYSKHVPVVSKRKIQYKNTQIVEPNSPENFLVMSEFNTTAMATSSTSQRHSVPHRQSLSPNYMNKTESSRAKVRSQSEPKQRPKRGMRHKGKSVESPLNGPRQNLFSNSLRFDRGSLDHWAINLHESMKDSKRDSFGSSSITTDSYY* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01422 380 SMART iq_5 126 147 IPR000048 GO:0005515
Phac6g01422 380 SMART iq_5 103 125 IPR000048 GO:0005515
Phac6g01422 380 Pfam IQ calmodulin-binding motif 131 145 IPR000048 GO:0005515
Phac6g01422 380 Pfam IQ calmodulin-binding motif 106 124 IPR000048 GO:0005515
Phac6g01422 380 ProSiteProfiles IQ motif profile. 104 132 IPR000048 GO:0005515
Phac6g01422 380 Pfam Protein of unknown function (DUF4005) 280 323 IPR025064 -
Phac6g01422 380 ProSiteProfiles IQ motif profile. 128 155 IPR000048 GO:0005515
Phac6g01422 380 MobiDBLite consensus disorder prediction 84 105 - -
Phac6g01422 380 MobiDBLite consensus disorder prediction 274 303 - -
Phac6g01422 380 PANTHER IQ-DOMAIN 5-RELATED 1 334 - -
Phac6g01422 380 MobiDBLite consensus disorder prediction 274 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01422 Phac-Chr6 16700315 16702817 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01422 1 349 IQD Protein Family AT4G14750 33.239 3.30e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01422 - - var:108318790 630.557