Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01415 ATGTTCGATGGAGCAGCACCAGACCAGTTCCACCAATTCATATCACCAAGGACCACTCTTCCTCTCCACTTGTCTTTCCCTCTCCATGCCTCTTCAACTCCCTCAACTACCTTCCTACCCTTTCATCATCCCCATAACGTTCCTTCTCAATCTCCACACCACTTCCCACTCCAACCCAATCTCTTCCACCCAATATTGCACCCCCCTTCCCCTACCCACAAACATCAACCACCACACAAGCTTGCTTCAATCCACATTCAAACAGACCAAACACAATTACCAGACCTAACCGATTCCTGGACCAACGATGAACTCCTTGCACTTTTGAGAATCAGATCTAGCATGGAAAATTGGTTCCCGGAGCACACGTGGGACCATGTCTCAAGGAAGCTGGCAGAGCTTGGGTTTAAGAAGAGTGCTGAGAAGTGCAAGGAGAAGTTCGAAGACGAGAGTAGATATTTCGACAACATTAGCAACTACGGCAAGAACAATTACCGGTTCTTTAGCGAGCTGGAGGAGCTTTGTCAAAACCCTGATCCGAGTGGTGGTGGTGATTGTGATGGTGATGATGGGATTGTGAGAAGTGAAGAGACCCTCCACATAGGAGGAGACAACATGGGCCATCAACATTGTGATCGAACAGAAGACAAGGTTGTGGTGGAAAAGTCAAAGCATCGCAAGAGGAAGAGGCGTGATAGGTTCGAAATGTTCAAGGGTTTTTGCGAGAGTGTTGTCAACAAGATGATGGCTCAACAAGAAGAGATTCACAACAGGCTCCTCGAGGACATGGTCAAAAGGGACCAAGAGAAGTTCACCAGAGAGGAAGCGTGGAAGAAGCAAGAGATGGAGAGAATGAACAAGGAGCTTGAGATCATGGCGCAGGAGCAAGCTATTGCAGGGGATAGACACGCCACCATAATTGAATTCTTAAAGAAATGTGCAACAACACCATTCCCTCCAACCCAAAATGCCAAGCACTACATCACAGACTGTTCAAATCTTCCAAATCGTTCATTGCACACTCAAAACCCTAATACTCCTTCCAAAGAAGACAACAACAATCTTGATCCAACACCTTCTCCTAAAATGCTTCTGAATCATGATCAAACTAAGTTGCAAGCAGAAAACCCTAGTTCAAGTGACACATTATTACAAGTTCCTTCCTCCTCCAACTCTTCCCCAACTCCCCACAACCCTAGTTCTTCCCTGAATAGCCATAATAATATGATTCCATTAGAGTCAAATTCAGTTTCCATTAGAGGCAGCAGTGAGAATTCGAAAGAGGATGTTGGGAGAAGATGGCCAAGGGATGAAGTGTTGGCACTGATAAACCTGAGGTGCACGAGTGTAAGTAACAACAACAATGAAGAGAAAGAAGGAAGCAATAAGGGTCCTCTGTGGGAGAGAATCTCTCAAGGGATGTCAGAGCTGGGATACAAGAGAAGTGCAAAGAGATGCAAAGAGAAGTGGGAGAACATAAACAAGTACTTCAGAAAAACCAAAGATGTTAACAAGAAAAGGTCCCTCAACTCTAGGACCTGTCCCTATTTCCATCAACTGAGTTGCCTGTATGGTCAGGGAAAAATTGTGTCACAGTCTGAAAGGGAAGGGAACTACATGAGTCCAACCACGAATTCCGGCCAAGTGCCACCGGATGATGATGAAGAAGTGGAAGCTGATGAGTCTTCTCATGTGGGGTAA 1701 0.4562 MFDGAAPDQFHQFISPRTTLPLHLSFPLHASSTPSTTFLPFHHPHNVPSQSPHHFPLQPNLFHPILHPPSPTHKHQPPHKLASIHIQTDQTQLPDLTDSWTNDELLALLRIRSSMENWFPEHTWDHVSRKLAELGFKKSAEKCKEKFEDESRYFDNISNYGKNNYRFFSELEELCQNPDPSGGGDCDGDDGIVRSEETLHIGGDNMGHQHCDRTEDKVVVEKSKHRKRKRRDRFEMFKGFCESVVNKMMAQQEEIHNRLLEDMVKRDQEKFTREEAWKKQEMERMNKELEIMAQEQAIAGDRHATIIEFLKKCATTPFPPTQNAKHYITDCSNLPNRSLHTQNPNTPSKEDNNNLDPTPSPKMLLNHDQTKLQAENPSSSDTLLQVPSSSNSSPTPHNPSSSLNSHNNMIPLESNSVSIRGSSENSKEDVGRRWPRDEVLALINLRCTSVSNNNNEEKEGSNKGPLWERISQGMSELGYKRSAKRCKEKWENINKYFRKTKDVNKKRSLNSRTCPYFHQLSCLYGQGKIVSQSEREGNYMSPTTNSGQVPPDDDEEVEADESSHVG* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01415 566 MobiDBLite consensus disorder prediction 533 550 - -
Phac6g01415 566 MobiDBLite consensus disorder prediction 533 566 - -
Phac6g01415 566 Gene3D - 100 156 - -
Phac6g01415 566 Gene3D - 434 499 - -
Phac6g01415 566 Pfam Myb/SANT-like DNA-binding domain 432 520 IPR044822 -
Phac6g01415 566 Pfam Myb/SANT-like DNA-binding domain 98 174 IPR044822 -
Phac6g01415 566 ProSiteProfiles Myb-like domain profile. 99 151 IPR001005 -
Phac6g01415 566 FunFam Trihelix transcription factor GTL2 434 499 - -
Phac6g01415 566 Coils Coil 279 299 - -
Phac6g01415 566 CDD GT1 432 501 - -
Phac6g01415 566 MobiDBLite consensus disorder prediction 326 410 - -
Phac6g01415 566 ProSiteProfiles Myb-like domain profile. 433 494 IPR001005 -
Phac6g01415 566 PANTHER FI21293P1 74 554 - -
Phac6g01415 566 FunFam Trihelix transcription factor GT-2 100 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01415 Phac-Chr6 16684637 16688057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01415 234 526 Trihelix Transcription Factor Family AT5G28300 48.667 5.50e-76 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phac6g01415 Myb_DNA-bind_4 7.8e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01415 - - vra:106774627 826.624