Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01403 ATGGCATCTCAGCACCACGATGCCGTTTTCCGCGAAGAAGACATGGACGACGACGACGACGAGTCTCAGGAGGACGAAGAGTTCGAAGAAGACGACGACGTTTTGGCCGCCGACGATGAAGAAAACGAGCGCTCTCCCTCCACCGCTCTCGCCGTCACCGTCGCCGTACCCGGTTCCGCCATCTCAAACGGCGGAGCCGCTCCACTTTCGACGTCCACCGCCACCACCATCGTTATCAGCGACTCTTCCGATCCGAAGAGGCGGCGCTTGGAGACAATCGAGGAGAAGAAGCCGCCGCCGCCGCTGGACGACTCGCGGCGGCTGTTCCAGCGGCTGTGGACCGACGAGGACGAGATCGAGCTACTGCAAGGGTTCCTGGACTACACCTCTCAGCGAGGATCCTCTCACCACAACGACACCGCTCTGTTCTACGACCAAATAAAGTCGAAGCTCCAACTCGATTTCAACAAGAACCAGCTGGTGGAGAAGATCCGAAGGCTGAAGAAGAAGTACCGAAACGTCCTCAACAAGATTGGCTCCGGCAAGGAATTCTCCTTCAAGAGCGCGCACGATCAAGCCACCTTCGAAATCTCTCGCAAGATCTGGAGCAGCGTGGCTCCAATCGGCGAAAATTCCTTGGACGACGACGAAATCAACCCTTGCGCCAACCCTAACCCTAGCCCCCACCCTAACCTTAATTTTAGCCCTGTAATTCACAAGAACGAAACGACTTCCAGGAATTCGGCGGAGAAAAAAACACCGAAACGCTCCAGACCTCGATCGGCGGTGAAAGTGGAGTCAAACGATGGATCGGCGTCGTACAGAGATCATAATTGTACTAGCAATGCTACAGCTACGGTTACTCCTACTGCTACCGCTACTAACACTACTGCTACTACTAATAACAATTGTAACAGTGGTTATAGCAAAAACATACCGAGTTTGATTGAGGAGACGGTGAGGAGTTGTTTGTCACCGGTGTTGAGGGAGTTGATGGGAGCGATGGGAGGGGGAGCGTTTGGGGGAAGAGGTTCGTTGAATTTAAACCCTCTGGCTTTGATGAATTTAAGTTATGGTGGTGGAGAATTGGTGGATGAGAAATGGAGGAAGCAACAGATATTGGAGTTGGAGGTGTACTCGAAGCGGTTGGAGCTGGTGCAGGATCAGATCAAGGCCGCCATGGAGGAGTTGCGTTCCAGTGGAGGAGGAGGAGGAGGAGGAGGCTGA 1227 0.5371 MASQHHDAVFREEDMDDDDDESQEDEEFEEDDDVLAADDEENERSPSTALAVTVAVPGSAISNGGAAPLSTSTATTIVISDSSDPKRRRLETIEEKKPPPPLDDSRRLFQRLWTDEDEIELLQGFLDYTSQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNKIGSGKEFSFKSAHDQATFEISRKIWSSVAPIGENSLDDDEINPCANPNPSPHPNLNFSPVIHKNETTSRNSAEKKTPKRSRPRSAVKVESNDGSASYRDHNCTSNATATVTPTATATNTTATTNNNCNSGYSKNIPSLIEETVRSCLSPVLRELMGAMGGGAFGGRGSLNLNPLALMNLSYGGGELVDEKWRKQQILELEVYSKRLELVQDQIKAAMEELRSSGGGGGGGG* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01403 408 PANTHER BNAANNG10740D PROTEIN-RELATED 4 396 IPR007592 GO:0006355
Phac6g01403 408 MobiDBLite consensus disorder prediction 244 263 - -
Phac6g01403 408 MobiDBLite consensus disorder prediction 13 39 - -
Phac6g01403 408 MobiDBLite consensus disorder prediction 76 103 - -
Phac6g01403 408 MobiDBLite consensus disorder prediction 82 103 - -
Phac6g01403 408 MobiDBLite consensus disorder prediction 213 282 - -
Phac6g01403 408 MobiDBLite consensus disorder prediction 264 282 - -
Phac6g01403 408 Coils Coil 157 177 - -
Phac6g01403 408 Coils Coil 376 396 - -
Phac6g01403 408 Pfam Protein of unknown function, DUF573 109 203 IPR007592 GO:0006355
Phac6g01403 408 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01403 Phac-Chr6 16626481 16628692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01403 1 404 GeBP Transcription Factor Family AT5G28040 43.612 7.71e-95 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Phac6g01403 DUF573 1.6e-34 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01403 - - gmx:100779712 593.964