Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01399 ATGGCCTCATCACTATCATCATCATCTTCTTCTCTAAAGTTTACAGTGCGAAGGTGCCAACCCCAGCTGGTGCCTCCTGCTATTCCCACTCCTCTTGAACTCAAGCTACTTTCCGACATTGATGATCAAGAAGCCCTGCGTTTCTACACTCCAGCGATACTAATTTATGGAAAGCAAGCATCAATGGCAGAGAAAGACCCAGTTGAAGTGATTCGGCAAGCACTGTCGCAAACACTTGTCTTCTACTACCCACTAGCGGGTAGGGTTAGGGAGGGAACTCACCGGAAATTAATGGTGGAATGCACCGGAGAAGGTGCAATGTTCATCGAGGCTGATGCTGACGTTGCACTGGCTGAGTTTGGTGATTCTCTCCAACCTCCATTCCCATGCTTCCATGAACTGCTATACCATGTTCCTGGCTCACAACAAATTACCAACACTCCCATTCTATTCGTACAGGTGACACGGCTTAATTGTGGTGGTTTCATTTTGGCCTTCTCCATCAACCATACCATGTGTGATGGAACTGGTGTTTCATACTTCATGAACACATGGGCTGAAATGGCTCGTGGTTCAACTAAACCTTCCATTCCACCAGTGTGGTGTAGGGAACTCCTGATGGCAAGACATCCACCTCGCATTACATGCAACCATCGCGAATACGAACATGTCCCAAACACCATCGAAGGAACCATCACATCAACCGAACACGACATGGTCCAACGATCGTTCTTCTTTGGACCTTCCCAAATAGCTGCTATTCGTCTCTTGGTTCCACCCCACCTTCAGCACTGCACCACGTTTGACATCATCACAGCATGTTTCTGGCGTTGTCGAACAAAAGCATTGCAGATAAAGGCAGATGAGGAGGTTCGCATGATGGTGATAGTGAATGGTCGTGCAAGGTTCAATCCTCCTTTACCTATCGGTTTCTACGGCAATGCTATTGCATACCCTGCAGCAGTTACCACTGCAGGGAAGCTTTGTGAAAATCCATTTGGGTATGCGGTGGAGTTAATAAAGAAAGTGAAAGCTGAGGTGACAGAGGAGTACATGCATTCAGTGGCAGATCTGATGGTGATTAAGGATCGGTGCATGTTTACAACCATAAGGTCTTGTATTATTTCAGATTTGACACGTTGGAGGTTTAGAGAAGTGAATTTTGGGTGGGGTGAGGCTGTGTACGGTGGAGTGGCCCAAGCTGGGATTGGGAGCTTTCTTGGAGGAACCTATCAAGTGTTGCATAAGAATGCAAAAGGAGAAGAAGGCATAGTCTTACCAATTTGGTTACCCGCTGAAGCTATGAATAGGTTTGCAAAAGAGTTGGATAAGATGTTCAAAAACCAAAACCAAACTACCATAAGGAAAAATACAGTGACACGGCTTAACTGTGGTGGTTTCATTTTGGCCTTCTCCACCAACCACACCATATGTGATGCAACTGGTGGTTCAAATTTCATAAACACGTGGGCTGAAATGGCTCGTGGTTCAACCAAACCTTCCATTTCACCTGTGTGGTGTAGGGAACTCCTGATGGCAAGAAATCCACCTCGCATTACATGCAACCATCGCGAATACGAACATGTCCCAGACACCATCGAAGGAACTATCACATCAACCGAACACGACATGGTTCAACGATCATTCTTCTTTGGACCTTCGCAAATAGCTGCTATTCGTCTCTTGGTTCCACCCCACCTTCAACACTGCACCACGTTTGACATCATCACAGCATGCTTCTGGCGTTGTCGTACAAAAGCATTGCAGATAGAGGCATATGAGGAGGTTTGCATGATGGTGATAGTGAATGGTCGTGCAAGGTTCAATCCTCCTTTACCTGTTGGTTACTAA 1851 0.4625 MASSLSSSSSSLKFTVRRCQPQLVPPAIPTPLELKLLSDIDDQEALRFYTPAILIYGKQASMAEKDPVEVIRQALSQTLVFYYPLAGRVREGTHRKLMVECTGEGAMFIEADADVALAEFGDSLQPPFPCFHELLYHVPGSQQITNTPILFVQVTRLNCGGFILAFSINHTMCDGTGVSYFMNTWAEMARGSTKPSIPPVWCRELLMARHPPRITCNHREYEHVPNTIEGTITSTEHDMVQRSFFFGPSQIAAIRLLVPPHLQHCTTFDIITACFWRCRTKALQIKADEEVRMMVIVNGRARFNPPLPIGFYGNAIAYPAAVTTAGKLCENPFGYAVELIKKVKAEVTEEYMHSVADLMVIKDRCMFTTIRSCIISDLTRWRFREVNFGWGEAVYGGVAQAGIGSFLGGTYQVLHKNAKGEEGIVLPIWLPAEAMNRFAKELDKMFKNQNQTTIRKNTVTRLNCGGFILAFSTNHTICDATGGSNFINTWAEMARGSTKPSISPVWCRELLMARNPPRITCNHREYEHVPDTIEGTITSTEHDMVQRSFFFGPSQIAAIRLLVPPHLQHCTTFDIITACFWRCRTKALQIEAYEEVCMMVIVNGRARFNPPLPVGY* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01399 616 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 23 443 - -
Phac6g01399 616 Gene3D - 235 447 IPR023213 -
Phac6g01399 616 Pfam Transferase family 19 444 - -
Phac6g01399 616 Pfam Transferase family 458 616 - -
Phac6g01399 616 Gene3D - 15 223 IPR023213 -
Phac6g01399 616 Gene3D - 449 512 IPR023213 -
Phac6g01399 616 Gene3D - 531 616 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01399 Phac-Chr6 16578800 16592243 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01399 459 616 Monolignol Biosynthesis Gene Families AT5G48930 30.061 1.72e-15 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01399 K19861 - pvu:PHAVU_006G098400g 665.225