Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01398 ATGGCCTCATCTTCTTCAACTCTAAGGTTTACAGTGCGAAGGTGCCAACCCCAGCTGGTGCCTCCTGCTATTCCCACTCCTCATGAACTCAAGCTACTTTCCGACATTGATGATCAAGAAGCCTTGCGTTTCCACAGTCCAGCAATACTAATTTATGGAAAGCAAGCATCAATGGCAGAGAAAGATCCAGTTGAAGTGATTCGGCAAGCACTGTCGCAAACACTTGTCTTCTATTACCCATTTGCAGGTAGGCTTAGGGAGGGACCTCAACGCAAATTAATGGTGGATTGCACTGGAGAAGATGCCATGTTCATCGAGGCTGATGCTGACGTTACACTGGCTGAGTTTGGTGATTCTCTCCAACCTCCATTCCCATGCTTCCATGAACTGCTATACCATGTTCCTAGCTCACAACAAATTACCAACACTCCCATTCTACACGTACAGGTGACAAGGCTTAAGTGCGGTGGTTTCATTTTGGCCTTCTCCATCAATCACACCATGTGTGATGGAACTGGTATTTCACAATTCATGAACACGTGGACTGAAATGGCTCGTGGTTCAACCAAACCTTCCATTCCACCTGTGTGGTGTAGGGAACTCCTAATGGCAAGACATCCACCTCGCATTACATGCAATCATCGCGAATACGAACATGTCCCAAACATCATCGAAGGAACCATCACATCAACCGAACACGACATGGTTCAACGATCATTCTTCTTTGGATCTTCCCAAATAGCTGCTATTCGTCTCTTGGTTCCACCCCACCTTCAGCACTGCACCACATTTGACATCATCACAGCATGTTTTTGGCGTTGTCGTACAAAAGCATTGCAGATAGAGGCAAATGAGGAGGTTCGCATGATGGTGATGGTGAATGGTCGTGCAAGGTTCAATCCTCCTTTACCTGTTGGTTACTATGGCAATGCCATTGCATTCCCTGCAGTAGTTACCACTGCAGGGAAGCTTTGTAAAAATCCATTTGGGTATGCAGTGGAGTTAATAAGGAAAGTGAAAAGTGAGGTGACAGAAGAGTACATGCTTTCGGTGGCAGATTTGATGGTGATTAAGGATCGGTGCATGTTTACAACCATAAGGTCTTGTATTATTTCAGATTTGACACGTGGGAGGTTTAGAGAAGTAAATTTTGGGTGGGGTGAGGCTGTGTACGGTGGAGTGGCCCAAGCTGGGATTGGGAGCTTTCTTGGAGGAACTTGTCAAATGTTGCATAAGAATGCAAAAGGAGAAGAAGGCATAGTCTTACCAATTTGGTTGCCTTCTCAAGCTATGAATAGGTTTGCAAAAGAGTTGGATAACATGTTCGGGAACCAAAACCAAACTACCATAAGGAGTCATACTTTTATCATGTCAACCTTATAG 1383 0.4497 MASSSSTLRFTVRRCQPQLVPPAIPTPHELKLLSDIDDQEALRFHSPAILIYGKQASMAEKDPVEVIRQALSQTLVFYYPFAGRLREGPQRKLMVDCTGEDAMFIEADADVTLAEFGDSLQPPFPCFHELLYHVPSSQQITNTPILHVQVTRLKCGGFILAFSINHTMCDGTGISQFMNTWTEMARGSTKPSIPPVWCRELLMARHPPRITCNHREYEHVPNIIEGTITSTEHDMVQRSFFFGSSQIAAIRLLVPPHLQHCTTFDIITACFWRCRTKALQIEANEEVRMMVMVNGRARFNPPLPVGYYGNAIAFPAVVTTAGKLCKNPFGYAVELIRKVKSEVTEEYMLSVADLMVIKDRCMFTTIRSCIISDLTRGRFREVNFGWGEAVYGGVAQAGIGSFLGGTCQMLHKNAKGEEGIVLPIWLPSQAMNRFAKELDNMFGNQNQTTIRSHTFIMSTL* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01398 460 Pfam Transferase family 15 439 - -
Phac6g01398 460 Gene3D - 231 442 IPR023213 -
Phac6g01398 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 18 439 - -
Phac6g01398 460 Gene3D - 7 219 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01398 Phac-Chr6 16567983 16571025 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01398 19 438 Monolignol Biosynthesis Gene Families AT5G48930 28.440 1.49e-49 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01398 K19861 - pvu:PHAVU_006G098400g 676.011