Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01396 ATGGCCTCATCTTTATCATCATCTTCTTCTTCTTCTCTAAAGTTTACAGTGCGAAGGTGCCAACCCCAGCTGGTGCCTCCTGCTATCCGCACTCCTCATGAACTCAAGCTACTTTCCGACATTGATGATCAAGAAGCCCTGCGTTTCCACGTTCCAATGATACACATTTATGAAAAACAAGCATCAATGGCAGAGAAAGATCCAGTTGAAGTGATTCGGCAAGCACTGTCGCAAACACTTGTTTTCTATTACCCATTTGCAGGTAGGCTTAGGGAGGGACCTCAACGCAAATTAATGGTGGATTGCACTGGAGAAGGAGCCATGTTCATCGAGGCTGATGCTGACGTCACACTGGCTGAGTTTGGTGATTTTCTCCAACCTCCATTCCCATGCTTCCATGAACTGCTGTACGATGTTCCTGGCTCACAACAAATTACCGACACTCCCCTTCTACTCGTACAGGTGACACGACTTAAGTGTGGTGGTTTCATCTTAGCCATCCGTCTTAACCACACCATGTGTGATGCTTTTGGTTACCAACAATTCATGAACGCTTGGGCTGAAATGGCTAGAGGAGCAATCAAACCTTCCATTGCACCAGTATGGCGTAGAGAGCTCCTAATGGCAAGAGATCCACCTCGCATTACACGCAACCATCGTGAATACGACCAAGTTCAAGATACCCTCCCTTCTTCCAACGACAACTTGGTTGAACGATCATTCTTCTTTGGACCCCTCGATATAGCTGCACTTCGCAAAACCATTCCCCAACACCTTCAGCATTGCTCCACATTTGATCTTATCACAGCATGCCTTCGGCAGTGTCGCACAAAAGCAATGCAGTTAGAGGCAGATGAGGATGTTCGCATGATGTGTGTAGTCAACGCACGTGGTCGGTTCAATCCTTCATTACCCGTTGGTTACTACGGCAATGCTTTTGCATATCCGGCGGCAGTAACGAGTGCAAGGAAGCTTTGCAGAAACCCATTTGGGTATGCGGTGGAGTTAATAAATAAAGTGAAAGGTGAGATGAAAGAAGAGTACTTGCAGTCTGTTGCAGACCTGATGGTGATGAAGGGGCGAAACTTATTATTCACAAATGTGAGGTCTTATATTATTTCATATTTGGCACGTGTGAATCTTAGAGCAGTGAATTTTGGATGGGGTGAGGCTGTGTATGCTGGAGTGGCCCAGGCTGGGGCTGGGAGCTTTCCAGGAGTATCGTTTTTATGTTCGGCTAAGAATGGAAAAGGAGAAGAAGGAATAATATTTTCGATTTGCTTGCCTGCTGAGGCTATGGAGAGGTTTTCGAAAGAGTTTATTCACATGCTTCGCAACCAAAACCAACCACAAAACACTATAATGTCTACCCTCCACACCATGGTTGATGGTTTTGGTTACCAACAATTCATGAATGCTTGGGCCGAAATGGCTAGAGGAGCAACCAAACCTTCCATTGCACCAGTATGGCGTAGGGAGCTACTAATGGCAAGAGATCCACCTCGCATTACACGCAACCATCGCGAATACGAGCAAATCCAAGATACCCTCCCTTCTTCCAACCACAACTTGGTTCAACGATCATTCTTCTTTAGACCCCTCGACATAGCTGCACTTCGCAAATCCATTCCCCAACACCTTCAACATTGCTCCACATTTGATCTTATCACAGCATGTCTCTGGCGATGTCGCACAAAAGCAATGCAGATAGAAGCAGATGAGGATGTTCGCATGATGTGCATAGTTAACGCACGTGGTCGGTTCAATCCTCCACTACCAGTGGGTTACTACGGCAATGCTTTTGCATATCCGGCGGCAGTAACGAGTGCAGGGAAGCTTTGCAAAAATCCATTTGGGTATGCGGTGGAGTTAATAAATAAAGTGAAAGGTGAGATGGAAGAAGAGTACTTGCAATCTGTTGCAGACTTGATGGTGATGAAGGAACGAAGCTTATTATTCACAACTGTGAGGTCTTATATTGTGTCATATTTGGCACGTACGAATTTTAGAGTAATGGATTTTGGGTGGGGTGAAGCTGTGTATGGTGGAGTGGCCCATGCTGGGGCTGGGGGCTTTCCAGGAGTATCTTTTTTCTGTTCTGCTAAGAATGGAAAAGGAGAAGAAGGAATAATATTTTCGATTTTCTTGCCTGCTGAAGCTATGGAGAGGTTTACCAAAGAGTTTAATGACATGCTTGGCAACCAAAACCAACCTCAAAGCACTTCTCCTAATTTTATAAGAAATGTATTGGTGACACGACTCAAGTGTGGTGGTTTCATCTTAGCCCTCCGCTTTAACCACACCATGGTTGATGCTTTTGGTTTCCAACAATTCATGAACGCTTGGGCTGAAATGGCTAGAGGAGCAACGAAACCTTCCATTGCACCAGTATGGTGTAGGGAGCTCCTAATGGCAAGAGATCCACCTCGCATTACACGCAACCATCGTGAATACGATCAAATCCAAGATACCTTCCCTTCTTCCAACCACAACTTGATTCAACGAACATTCTTCTTTGGACGCCTCGATATAGCTACACTTCGCAAATCTATTCCCCAACACCTTCAACATTGCTCCACATTTGATCTTATCGCAGCATGTCTTTGGCGATGTCGCACAAAAGCAATGCAGATAGAGGAAAATGAGGATGTTCGCATGATGTGCATAGTTAACGCACGTGGTCGGTTCAATCCTCCACTGCCAGTTGGTTACTACGGCAACAGCTTTGCATATCCGGCAGCAGTAACGAGTGCAGGGAAGCTTTGCAAAAACCCATTTGGGTATGCGGTGGAGTTAATAAATAAAGTGAAAGGTGAGATGAAACAAGAGTACTTGCAATCTGTTGCAGACCTGATGGTGATGAAGAGACGAAGCTTGTTATTCACAACTGTGAGGTCTTGTATTGTGTCATATTTGGCACAAGTAAAATTTAGAGCAGTTGATTTTGGGTGGGGTGAGGCTGTGTATGGTGGAGTGGCCCAAGCTGGGGCTGGGAGCTTTCCAGGGGCATCTTATTTCTGTTCTGCTAAGAATGGAAAAGGAGAAGAAGGAATAATATTTACGATTAGCTTGCCTGCTGAAGCTATGGAGAGATTTGCCAAAGAGTTTAATCACATGCTTCACAACCAAAACCAACCTCAAAGCACTTTTGCTAATTTTATAACGTCTACCCTGTAA 3177 0.4511 MASSLSSSSSSSLKFTVRRCQPQLVPPAIRTPHELKLLSDIDDQEALRFHVPMIHIYEKQASMAEKDPVEVIRQALSQTLVFYYPFAGRLREGPQRKLMVDCTGEGAMFIEADADVTLAEFGDFLQPPFPCFHELLYDVPGSQQITDTPLLLVQVTRLKCGGFILAIRLNHTMCDAFGYQQFMNAWAEMARGAIKPSIAPVWRRELLMARDPPRITRNHREYDQVQDTLPSSNDNLVERSFFFGPLDIAALRKTIPQHLQHCSTFDLITACLRQCRTKAMQLEADEDVRMMCVVNARGRFNPSLPVGYYGNAFAYPAAVTSARKLCRNPFGYAVELINKVKGEMKEEYLQSVADLMVMKGRNLLFTNVRSYIISYLARVNLRAVNFGWGEAVYAGVAQAGAGSFPGVSFLCSAKNGKGEEGIIFSICLPAEAMERFSKEFIHMLRNQNQPQNTIMSTLHTMVDGFGYQQFMNAWAEMARGATKPSIAPVWRRELLMARDPPRITRNHREYEQIQDTLPSSNHNLVQRSFFFRPLDIAALRKSIPQHLQHCSTFDLITACLWRCRTKAMQIEADEDVRMMCIVNARGRFNPPLPVGYYGNAFAYPAAVTSAGKLCKNPFGYAVELINKVKGEMEEEYLQSVADLMVMKERSLLFTTVRSYIVSYLARTNFRVMDFGWGEAVYGGVAHAGAGGFPGVSFFCSAKNGKGEEGIIFSIFLPAEAMERFTKEFNDMLGNQNQPQSTSPNFIRNVLVTRLKCGGFILALRFNHTMVDAFGFQQFMNAWAEMARGATKPSIAPVWCRELLMARDPPRITRNHREYDQIQDTFPSSNHNLIQRTFFFGRLDIATLRKSIPQHLQHCSTFDLIAACLWRCRTKAMQIEENEDVRMMCIVNARGRFNPPLPVGYYGNSFAYPAAVTSAGKLCKNPFGYAVELINKVKGEMKQEYLQSVADLMVMKRRSLLFTTVRSCIVSYLAQVKFRAVDFGWGEAVYGGVAQAGAGSFPGASYFCSAKNGKGEEGIIFTISLPAEAMERFAKEFNHMLHNQNQPQSTFANFITSTL* 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01396 1058 Pfam Transferase family 749 1039 - -
Phac6g01396 1058 Pfam Transferase family 21 442 - -
Phac6g01396 1058 Pfam Transferase family 455 731 - -
Phac6g01396 1058 Gene3D - 16 219 IPR023213 -
Phac6g01396 1058 Gene3D - 521 734 IPR023213 -
Phac6g01396 1058 Gene3D - 453 512 IPR023213 -
Phac6g01396 1058 Gene3D - 220 441 IPR023213 -
Phac6g01396 1058 Gene3D - 811 1037 IPR023213 -
Phac6g01396 1058 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 23 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01396 Phac-Chr6 16531535 16557989 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01396 459 726 Monolignol Biosynthesis Gene Families AT5G48930 28.873 1.05e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01396 K19861 - pvu:PHAVU_006G098400g 777.704