Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01395 ATGGCCTCATCTTTATCATCTTCTTCTTCTTCTCTACTAAAGTTTACAGTGCGAAGGTGCCAACCCCAGCTGGTGGCTCCTGCTATCCCCACTCCTCATGAACTCAAGCTACTTTCCGACATTGATGATCAAGAAGCCCTGCGTTTCCACATTCCAATGATACAAATTTATGGAAAGCAAGCATCAATGGCAGAGAAAGACCCAGTTGAAGTGATTCGGAAAGCACTGTCGCAAACACTTGTCTTCTATTACCCATTTGCGGGTAGGCTTAGGGAGGGACCTCGCCGCAAATTAATGGTGGATTGCACTGGAGAAGGAGCCATGTTCATCGAGGCTGATGCTGACGTCACACTGGCTGACTTTGGTGATTCACTCCAACCTCCATTTCCATGCTTCCATGAACTGCTGTACGATGTTCCTGGCTCACAACAAATTACCGACACTCCCCTTTTACTCGTACAGGTGACACGACTCAAGTGTGGTGGTTTCATCTTAGCCCTCCGCTTTAACCACACAATGGCTGATGGTTTTGGTTACCAACAATTCATGAATGCTTGGACCGAAATGGCTAGAGGAGCAACCAAACCTTCCATTGCACCAGTATGGCGTAGGGAACTCCTAATGGCAAGAAATCCACCTCGCATTACATGCAACCATCACGAATACGAGCAAATCCAAGATACCCTCCCTTCTTCCAACCACAACTTGATTCAACGATCATTCTTCTTTGGACCCCTCGACATAGCCGCACTTCGCAAATCCATTCCCCAACACCTTCAACATTGCTCCACATTTGATCTTATCACAGCATGTCTTTGGCGATGTCGCACAAAAGCAATGCAGATAGAGGCAGATGAGGATGTTCGCATGATGTGCATAGTCAACGCACGTGGTCGATTCAATCCTCCACTACCGATTGGTTACTACGGCAACAGCTTTGCATATCCGGCAGCAATAACGAGTGCAGGGAAGCTTTGCAAAAACCCATTTGGGTATGCGGTGGAGTTAATAAATAAAGTGAAAGGTGAGATGAAAGAAGAGTACTTGCAATCTGTTGCAGACCTGATGGTGATGAAGGGACGAAGCTTATCATTCACAACTGTGAGGTCTTGTATTGTGTCATATTTGGCACGTGTGAATCTTAGAGCAGTGGATTTTGGGTGGGGTGAGGCTGTGTATGGTGGAGTGGCCCAAGCCGGGGCTGGGAGCTTTCCAGGGGCATCTTATTTCTGTTCTGCTAAGAATGGAAAAGGAGAAGAAGGTATAATATTTCCGATTTTCTTGCCTGCGGAAGCTATGGAGAGGTTTGCCAAAGAGTTTAATCACATGCTTCGTCATTCTCATCATGTGACACGACTTAAGTGTGGTGGTTTCATCTTAGTCATCCGCTTCAACCACACCATGTGTGATGGTTTTGGTTACCAACAATTCATTAACGCTTGGGCCGAAGTAGCTAGAGGAGCAACCAAACCTTCCATTGCACCAGTATGGCGTAGGGAACTTCTAATGGCAAGAGATCCACCTCGCATTGCATTTAACCATCGTGAATATGAGCAAATCCAAGATAATCTTCCTTCTTCCAACCACAACTTGATTCAACGATCATTCTTCTTTGGACCCGTCGACATAGCTGCACTTCGCAAATTGATTCCCCAACACCTTCAACATTGCTCCACATTTGATCTTATCACAGCATGCCTTTGGCGGTGTCGCACAAAAGCAATGCAGATAGAGGCAGATGAGGATGTTCGCATGATGTGCATAGTCAACGCACGTGGTCGGTTCAATCCTCCACTACCGGTTGGTTACTACGGCAACGGCTATGCATATTTGGCGGCAGTAACGAGTGCAGGGAAGCTTTGCAGATACCCATTTGGATATGCGGTGGAGTTAATAAATAAAGTGAAAGGTGAGATGAAAGAAGAGTACTTGCAATCTGTTGCAGACTTGATGGTGATGAAGGGACGAAGCTTATTATTCACAACTGTGAGGTCTTGTATTGTGTCATATTTGGCTCGTGTGAATCTTAGAGCAGTGGATTTTGGTTGGGGTAAGGCTGTGTATGGTGGAGTGGCCCAAGCTGGGGCTGGGAGCTTTCCAGGAGTATCATATTTTTGTTCGGCTAAGAATGGAAAAGGAGAAGGTATAATATTTCCGATTTTCTTGCCTGCGGAAGCTATGGAGAGGTTTGCCAAAGAGTTTAATCACATGCTTTGCAACCAAAACCAACATCAAAGCACTTTATAA 2247 0.4579 MASSLSSSSSSLLKFTVRRCQPQLVAPAIPTPHELKLLSDIDDQEALRFHIPMIQIYGKQASMAEKDPVEVIRKALSQTLVFYYPFAGRLREGPRRKLMVDCTGEGAMFIEADADVTLADFGDSLQPPFPCFHELLYDVPGSQQITDTPLLLVQVTRLKCGGFILALRFNHTMADGFGYQQFMNAWTEMARGATKPSIAPVWRRELLMARNPPRITCNHHEYEQIQDTLPSSNHNLIQRSFFFGPLDIAALRKSIPQHLQHCSTFDLITACLWRCRTKAMQIEADEDVRMMCIVNARGRFNPPLPIGYYGNSFAYPAAITSAGKLCKNPFGYAVELINKVKGEMKEEYLQSVADLMVMKGRSLSFTTVRSCIVSYLARVNLRAVDFGWGEAVYGGVAQAGAGSFPGASYFCSAKNGKGEEGIIFPIFLPAEAMERFAKEFNHMLRHSHHVTRLKCGGFILVIRFNHTMCDGFGYQQFINAWAEVARGATKPSIAPVWRRELLMARDPPRIAFNHREYEQIQDNLPSSNHNLIQRSFFFGPVDIAALRKLIPQHLQHCSTFDLITACLWRCRTKAMQIEADEDVRMMCIVNARGRFNPPLPVGYYGNGYAYLAAVTSAGKLCRYPFGYAVELINKVKGEMKEEYLQSVADLMVMKGRSLLFTTVRSCIVSYLARVNLRAVDFGWGKAVYGGVAQAGAGSFPGVSYFCSAKNGKGEGIIFPIFLPAEAMERFAKEFNHMLCNQNQHQSTL* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01395 748 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 23 436 - -
Phac6g01395 748 Gene3D - 529 740 IPR023213 -
Phac6g01395 748 Gene3D - 16 219 IPR023213 -
Phac6g01395 748 Gene3D - 437 528 IPR023213 -
Phac6g01395 748 Gene3D - 220 436 IPR023213 -
Phac6g01395 748 FunFam Spermidine hydroxycinnamoyl transferase 15 222 - -
Phac6g01395 748 Pfam Transferase family 449 737 - -
Phac6g01395 748 Pfam Transferase family 20 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01395 Phac-Chr6 16518387 16528144 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01395 424 732 Monolignol Biosynthesis Gene Families AT5G48930 28.916 2.22e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01395 K19861 - pvu:PHAVU_006G098400g 827.394