Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01352 ATGGAGTGCAACAAGGATGAAGCTGTGAGGGCTAAGCAGATTGCTGAAAATAAGATGCAAGCTGGTGACTATGAAGGGGGGCTGAAATTTGCTACAAAAGCCCAAAGGCTGTTTCCTGATATTCAGAACATTGTTCAGATCCTTGCAGTTTGTGATGTTCACTGTGCTGCTCAGAAGAAACACTCCGGGTCTGACATGGACTGGTATGGAATTCTTCAGACTCAACAGTCTGCTGATGAAGCAACCATTAAGAAACAGTATAGAAAGCTTGCACTGCTACTTCATCCTGATAAAAATAAATCCGCTGGTGCAGAGGCTGCTTTCAAGTTGATTGGTGAAGCTAACAGAGTGTTAAGTGATCAATGCAAGCGGGCTCTGTATGACTCAAAGATTGGAATTTCAGTGGGAAATACAGCAGCTAAGGTCGCACCTAGTCACCCAAATGGAAATGCAGGGAATTATCAGAACATTTTTAATTCACAGCCCCATGCTTGGAATCCATATCATCAGTTTGAAAATCAGACATTCTGGACATGTTGCTCTCATTGTAATACTAGATATCAATACTACAAAACTATTTTAAATCAGACCTTACGCTGTCAACAATGTTCTAAATCCTTTACAGCTCATGATATGGGGAACCACAATGTGCCACCAACATATTGGTCACCTTTTAATAACCACAAAGAGTCTGCAAAACATGCATCATCTAAAGAAGCATCAAAAAGCAATGGTGGAAAATCTCATGGTATAGAAGAGGAGGGTGTGTCCATGTCAAAATGCACTGCTGGAGTTGGTGCCTATTCTAAAGTTGCAAATAGCAGAAATGGCCACGTGGCTGCAGGAGTGACAAAGGTTGGTGTTAAAGTGTTCAAAGCCAAGGAATCACAAGCCTCAACGAAGGTTGGTTGTAAAAGAGCAAGGCAGTCAGCATCAAATGATAATAACAAAGCTGGAAATGGTAAAGGCATGAAAGATACCAAGGATCAAGAAAATACGGTTGATCCTCATAGGAAAACTTCAAGAAAAAAACAGCATGTTCTGTACCCAGAAACCGATAAAGCTAGTGATTTTGGGAGTTTACCCAGAAGGCCACGACACCATGAATCATTTACCACCCCTAAAGTAGAGGAAAAAGAAGTGCCAGCAACTGGTTGGTTGTTCAGTAACCTTAATCCAGCCTATTGTGCTACAGGTGTGGGTGGTCAGAATGGGGAGACAATAAATAAAGCAAGTGAACCACATGAAGAAACAACTTTAACGAATAAAGCCAAAGTTGAGCAGACAAATGTGCTAGGAAGGGAGGTATTAAACTCAGATCTGAATGATAGAAAGTCTAAAGCCAACTATTGTTCTCCATCGAAGTCAAATTTACCTCCCAATGCAGAGATTTCCTGTCCTGATCCAGATTTCAGTGATTTTGAGAGAGATAAGGCAGAGGATTGTTTTGCTGTTAATCAATTATGGGCTATTTTTGATAATGATGATGGTATGCCAAGATTCTATGCTCTCGTGAAGAAAGTGTACTCCCCTTTCAGGTTGCGGATTACGTGGCTAGAAGCTGACTCAGATGACCTAGGTGAGATTAGGTGGCATGAAGCAGGTTTGCCTATTGCTTGTGGTAAGTTCAGACTCGGTGATTCTCAGAGAACTTCAGATCGTTTTATGTTCTCTCATCAGATGCATTGCATAAAAGGAAGTGACACTAGTACATATCTGATATATCCAAAGAAGGGAGAAACTTGGGCAATTTTCAGACATTGGGATCTTGGATGGAGTTCAAATCCAGAAAAACATTTGGAGTATCAATTTGAATATGTGGAAGTTCTATCAGATTTTGATGAAAATGTTGGCATTGAAGTTGCGTATCTTGGCAAACTGGAAGGATTTGTTAGTCTCTTTCAGCATACTGTATTGAATAGTATTAGCTTATTTTGTATTTCACCTCATGAAATGTACAGGTTCTCTCATCGGATTCCTTCCTACAAGATGACAGGTGCTGAAAGGAAAGGTGTTCCAAGTGGATCTTTTGAACTTGATCCTGCTGGTCTGCCTACTTGTCTTTTTGAAGTCGGTGATACTGGTGTTGCGAAAATGGATGGAGTCAATTGTTCTCACCGGGACTACTCAAACTCAAAAGTTGAACAGGCAAAGTCTAGTGATAGTATTCACAAATCGAAGTTGCAAGAGAGTATTGACTCTGAAAGAGCAGCACAAATCCTCAGAAGGTCTCCAAGGTCGAGCCAAAAAAGTATGGACAATGGCCAAGCAAGCACTAGACAATTCACGGTCAGAAAGGATGACATAAACATTGACCACAGGGACTACAGTCCACCAGAGGGAAACGCTGCTTCATCTCAGACTAATGCGAGGAAGGTCAAGACACCTCAGAAACAAGAGAAAAATAGTTATGATGGAGAGACATTGAAAACTCGAAAGTTGCCTAGAGATCTAAGCAAGAAAGATGCTCTAGGAGATGCATCTGAAAGGACAAGATGTAAGTTGACTGCTAATCATTCAAAAAACAGCAAAAATGTGAAGAGCACCAACATTCCTCAGTTGGTTGGAGAATCATTTTCTGACTTTAAAAAGGAAAAAACTGAAAAGATGTTTCAGTGTGGTCAGATATGGGCAATATATGGTGATAGGGATCAAATGCCCAATACTTACGCCCAAATTAAGAAGATTGAATTCACTCCTAGTTTTAGAGTGCAGGTTTCCATGCTTGAACCCTGCCCAGTACCAAGTGTTAAAAGAGCTTTATCTTGTGGAACCTTCGAAGTTAAAAAATCCAAATTACAGATTCTCTCTCCCTCTGCATTCTCTCATCAGTTAAAAGTTGAACCCTTGGTAAATAATCGATATGAAATTTACCCTAGAAAAGGTGAGGTTTGGGCTCTGTACGAGGATCAGAACTATGAACTGACTTCTTCAAACCACGGCAGAGGTAAATGTAATATAGTAGAAGTATTAGCAGATAATGAGAAGAGTATACAGGTTGTTGTTCTGTCGCCACATAACAACTCTCAGACAATTTTCAAAGCTCCCAGAATTCAGAGATCTAAAACTGGTGTAATTGAAATATTAAGAGAAGAGGTTGGCAGGTTTTCACATCAGATTCCTGCTTTTCAGCACAGGGACAGTGTGCATCTCATGGGGTGTTGGGAGCTTGATCCTTCTTCAGTTCCTGGTTCTTTTGTACCAATAAACTGA 3213 0.4052 MECNKDEAVRAKQIAENKMQAGDYEGGLKFATKAQRLFPDIQNIVQILAVCDVHCAAQKKHSGSDMDWYGILQTQQSADEATIKKQYRKLALLLHPDKNKSAGAEAAFKLIGEANRVLSDQCKRALYDSKIGISVGNTAAKVAPSHPNGNAGNYQNIFNSQPHAWNPYHQFENQTFWTCCSHCNTRYQYYKTILNQTLRCQQCSKSFTAHDMGNHNVPPTYWSPFNNHKESAKHASSKEASKSNGGKSHGIEEEGVSMSKCTAGVGAYSKVANSRNGHVAAGVTKVGVKVFKAKESQASTKVGCKRARQSASNDNNKAGNGKGMKDTKDQENTVDPHRKTSRKKQHVLYPETDKASDFGSLPRRPRHHESFTTPKVEEKEVPATGWLFSNLNPAYCATGVGGQNGETINKASEPHEETTLTNKAKVEQTNVLGREVLNSDLNDRKSKANYCSPSKSNLPPNAEISCPDPDFSDFERDKAEDCFAVNQLWAIFDNDDGMPRFYALVKKVYSPFRLRITWLEADSDDLGEIRWHEAGLPIACGKFRLGDSQRTSDRFMFSHQMHCIKGSDTSTYLIYPKKGETWAIFRHWDLGWSSNPEKHLEYQFEYVEVLSDFDENVGIEVAYLGKLEGFVSLFQHTVLNSISLFCISPHEMYRFSHRIPSYKMTGAERKGVPSGSFELDPAGLPTCLFEVGDTGVAKMDGVNCSHRDYSNSKVEQAKSSDSIHKSKLQESIDSERAAQILRRSPRSSQKSMDNGQASTRQFTVRKDDINIDHRDYSPPEGNAASSQTNARKVKTPQKQEKNSYDGETLKTRKLPRDLSKKDALGDASERTRCKLTANHSKNSKNVKSTNIPQLVGESFSDFKKEKTEKMFQCGQIWAIYGDRDQMPNTYAQIKKIEFTPSFRVQVSMLEPCPVPSVKRALSCGTFEVKKSKLQILSPSAFSHQLKVEPLVNNRYEIYPRKGEVWALYEDQNYELTSSNHGRGKCNIVEVLADNEKSIQVVVLSPHNNSQTIFKAPRIQRSKTGVIEILREEVGRFSHQIPAFQHRDSVHLMGCWELDPSSVPGSFVPIN* 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01352 1070 SUPERFAMILY Chaperone J-domain 64 130 IPR036869 -
Phac6g01352 1070 Pfam Domain of unknown function (DUF3444) 857 1045 IPR024593 -
Phac6g01352 1070 Pfam Domain of unknown function (DUF3444) 462 668 IPR024593 -
Phac6g01352 1070 MobiDBLite consensus disorder prediction 297 371 - -
Phac6g01352 1070 MobiDBLite consensus disorder prediction 302 320 - -
Phac6g01352 1070 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 711 915 - -
Phac6g01352 1070 MobiDBLite consensus disorder prediction 321 338 - -
Phac6g01352 1070 MobiDBLite consensus disorder prediction 741 764 - -
Phac6g01352 1070 MobiDBLite consensus disorder prediction 713 827 - -
Phac6g01352 1070 CDD DnaJ 67 120 IPR001623 -
Phac6g01352 1070 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Phac6g01352 1070 MobiDBLite consensus disorder prediction 222 254 - -
Phac6g01352 1070 MobiDBLite consensus disorder prediction 345 371 - -
Phac6g01352 1070 MobiDBLite consensus disorder prediction 794 827 - -
Phac6g01352 1070 PRINTS DnaJ domain signature 103 123 IPR001623 -
Phac6g01352 1070 PRINTS DnaJ domain signature 87 102 IPR001623 -
Phac6g01352 1070 PRINTS DnaJ domain signature 69 87 IPR001623 -
Phac6g01352 1070 SMART dnaj_3 66 123 IPR001623 -
Phac6g01352 1070 MobiDBLite consensus disorder prediction 713 740 - -
Phac6g01352 1070 Pfam DnaJ domain 67 128 IPR001623 -
Phac6g01352 1070 Gene3D DnaJ domain 52 143 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01352 Phac-Chr6 16320923 16325928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01352 4 219 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.484 3.33e-26 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01352 - - var:108342824 1808.88