Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01343 ATGGTCCCAATTGGTCATGCTTCTGATGACAAGCAGAGAAATCAAGACTCAGGAGAAATCGTTTTGGAGAAAGACAAAAGTGTGGTAACACTAAGAGAACTCTTTGAAGAATGCATTAGTGACACTGACAAATCTCATCAACCACCTGAATTTGCAAGCAGTAATCCAAGCTCAAGGACACGGTTTCACTGGAGGATGTTTTTAAAACCATGCAAAATGAGATCAATGGAGCACCTACCCTCTTTTCCTTCAAGTTGTTTGTCAAGCATAACAAAGCCTACAAGCAAAGACATTGGAAAAAACACTATTCAATGTAATCCACACAGTTCCAGAACTTTGGTGAATTTCAGGCTTTCTGACCTGAGAAATGCAACCAACAACTTTAGCAATGAGAATATAATTGGAAGAGGTGGCTATGCTTATGTTTACAAGGGTAGCCTACAAGATGGGCAATTAATAGCAGTTAAGCAACTGCGTAGAGGGACTCCAGAAGACAGAATATCAATTCTTCTATCTGAGCTAGGAATTCTTGCTCATGTTGACCACCCTAATACTGCCATGCTTATTGGATTTGGAGTAGAAGGGGGAATGCACCTTGTATTCCAATTATCTCCTCTGGGAAATTTAGGATCTCTTCTTCATGGTCCAGATAAAAATATATTAGATTGGAGCAAAAGGTATAAAATAATTTTGGGGATAGCGGATGGCCTCCTCTATCTTCATGAGATTTGTCAAAGGCGAATCGTTCATAGAGATCTTAAATCAGATAATATTCTGCTGACAGAGAATTTTGAGCCACAGATTTGTGATTTTGGGCTCTCAAAATGGCTACCAGAACCCTGTACTCATCATATTGTTTCAAAATTTGAAGGCACAATGGGGTATTTTGCTCCTGAGTATTTGACGCTTGGCATAGTAAACGAAAAAACTGATATTTATTCCTTTGGGGTCTTACTTTTGGAGATTATAACTGGGCGTCATGCTTTGGATCATTTGAAAGAAAGTATTGTGTCATGGGCAAAGCCTTTATTCCAAGCTAATAATATTAAGGACCTTGTTGATCCTTCTCTGGGTGATGATTATGTCTGGGAACAAATGGAACGTGTTGTTTTGACAGCATCTCTGTGTGTTGAGCAGTTTCCTATCTTACGCCCCAGCATGAGTCAGATTGCAGTACTGCTAAGAGGTGATGACTATGTGATGGAACATAGTGAGAGGAGTAACAAGATGCCGAAGAAAACAACTGAAGGAGCTATCTAA 1260 0.3952 MVPIGHASDDKQRNQDSGEIVLEKDKSVVTLRELFEECISDTDKSHQPPEFASSNPSSRTRFHWRMFLKPCKMRSMEHLPSFPSSCLSSITKPTSKDIGKNTIQCNPHSSRTLVNFRLSDLRNATNNFSNENIIGRGGYAYVYKGSLQDGQLIAVKQLRRGTPEDRISILLSELGILAHVDHPNTAMLIGFGVEGGMHLVFQLSPLGNLGSLLHGPDKNILDWSKRYKIILGIADGLLYLHEICQRRIVHRDLKSDNILLTENFEPQICDFGLSKWLPEPCTHHIVSKFEGTMGYFAPEYLTLGIVNEKTDIYSFGVLLLEIITGRHALDHLKESIVSWAKPLFQANNIKDLVDPSLGDDYVWEQMERVVLTASLCVEQFPILRPSMSQIAVLLRGDDYVMEHSERSNKMPKKTTEGAI* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01343 419 MobiDBLite consensus disorder prediction 1 20 - -
Phac6g01343 419 Pfam Protein kinase domain 129 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01343 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Phac6g01343 419 SUPERFAMILY Protein kinase-like (PK-like) 106 394 IPR011009 -
Phac6g01343 419 SMART serkin_6 128 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01343 419 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 205 408 - -
Phac6g01343 419 ProSitePatterns Protein kinases ATP-binding region signature. 134 156 IPR017441 GO:0005524
Phac6g01343 419 Gene3D Transferase(Phosphotransferase) domain 1 205 415 - -
Phac6g01343 419 Gene3D Phosphorylase Kinase; domain 1 89 202 - -
Phac6g01343 419 PANTHER OS08G0249100 PROTEIN 13 409 IPR046958 -
Phac6g01343 419 ProSiteProfiles Protein kinase domain profile. 128 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01343 Phac-Chr6 16275444 16280475 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01343 116 390 Trihelix Transcription Factor Family AT1G68690 42.456 6.83e-67 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Phac6g01343 Pkinase 3.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01343 - - gmx:113001177 617.076